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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170356153
CETJ01008769
275457
Gammaproteobacteria
ACG
Arg
>WENV170356154
CETJ01008769
275457
Gammaproteobacteria
ACG
Arg
>WENV170356788
CETJ01067211
779495
Gammaproteobacteria
CCC
Gly
>WENV170356701
CETJ01059531
273854
Gammaproteobacteria
CAT
Met
>WENV170356082
CETJ01004494
656944
Gammaproteobacteria
CCT
Arg
>WENV170356944
CETJ01084330
653594
Gammaproteobacteria
CCT
Arg
>WENV170356136
CETJ01007404
273856
Gammaproteobacteria
GAC
Val
>WENV170356302
CETJ01019937
467367
Gammaproteobacteria
GGT
Thr
>WENV170357144
CETJ01096973
456706
Gammaproteobacteria
TGT
Thr
>WENV170357010
CETJ01089631
456706
Gammaproteobacteria
TGT
Thr
>WENV170357457
CETJ01190028
456247
Gammaproteobacteria
CCA
Trp
>WENV170356660
CETJ01056260
454967
Gammaproteobacteria
TTT
Lys
>WENV170356661
CETJ01056260
454967
Gammaproteobacteria
TTT
Lys
>WENV170356461
CETJ01034255
12379
Gammaproteobacteria
GCT
Ser
>WENV170357216
CETJ01128176
273847
Gammaproteobacteria
CCT
Arg
>WENV170356927
CETJ01082342
273857
Gammaproteobacteria
TGG
Pro
>WENV170356509
CETJ01040247
273844
Gammaproteobacteria
CCG
Arg
>WENV170356098
CETJ01005151
272970
Gammaproteobacteria
CCG
Arg
>WENV170356807
CETJ01068386
780642
Gammaproteobacteria
GCA
Cys
>WENV170356269
CETJ01017064
452332
Gammaproteobacteria
GTG
His
>WENV170356957
CETJ01085565
655197
Gammaproteobacteria
TTG
Gln
>WENV170357043
CETJ01092120
278982
Gammaproteobacteria
CCG
Arg
>WENV170357378
CETJ01176471
87214
Gammaproteobacteria
GGA
Ser
>WENV170356656
CETJ01055976
218101
Gammaproteobacteria
GTA
Tyr
>WENV170356928
CETJ01082342
273858
Gammaproteobacteria
TCT
Arg
>WENV170356398
CETJ01028269
275518
Gammaproteobacteria
ACG
Arg
>WENV170356399
CETJ01028269
275518
Gammaproteobacteria
ACG
Arg
>WENV170357078
CETJ01094985
47267
Gammaproteobacteria
GGA
Ser
>WENV170357288
CETJ01151399
273859
Gammaproteobacteria
CGG
Pro
>WENV170356657
CETJ01055976
780101
Gammaproteobacteria
TCC
Gly
>WENV170356845
CETJ01071997
781121
Gammaproteobacteria
GCA
Cys
>WENV170356414
CETJ01029140
452377
Gammaproteobacteria
GTT
Asn
>WENV170356765
CETJ01064194
452377
Gammaproteobacteria
GTT
Asn
>WENV170356485
CETJ01037086
113485
Gammaproteobacteria
CAA
Leu
>WENV170357209
CETJ01125565
45712
Gammaproteobacteria
GGA
Ser
>WENV170356361
CETJ01025375
281567
Gammaproteobacteria
CAT
Met
>WENV170357069
CETJ01094537
452881
Gammaproteobacteria
TGT
Thr
>WENV170356521
CETJ01042087
454969
Gammaproteobacteria
GTT
Asn
>WENV170357139
CETJ01096924
114727
Gammaproteobacteria
TAA
Leu
>WENV170357011
CETJ01089795
271613
Gammaproteobacteria
GTC
Asp
>WENV170357349
CETJ01168299
273845
Gammaproteobacteria
GGG
Pro
>WENV170356311
CETJ01020652
276972
Gammaproteobacteria
CCA
Trp
>WENV170356265
CETJ01016792
276972
Gammaproteobacteria
CCA
Trp
>WENV170356138
CETJ01007601
273852
Gammaproteobacteria
GTC
Asp
>WENV170357456
CETJ01189938
456234
Gammaproteobacteria
GAA
Phe
>WENV170356863
CETJ01074306
112814
Gammaproteobacteria
GAG
Leu
>WENV170356833
CETJ01071002
779494
Gammaproteobacteria
GCA
Cys
>WENV170356397
CETJ01028269
31220
Gammaproteobacteria
GCT
Ser
>WENV170356658
CETJ01055976
655194
Gammaproteobacteria
GGT
Thr
>WENV170357109
CETJ01095833
47265
Gammaproteobacteria
TGA
Ser
>WENV170356168
CETJ01009653
451870
Gammaproteobacteria
CCA
Trp
>WENV170356794
CETJ01067633
30792
Gammaproteobacteria
GGA
Ser
>WENV170357131
CETJ01096667
273328
Gammaproteobacteria
GAC
Val
>WENV170356864
CETJ01074306
271253
Gammaproteobacteria
CAT
Met
>WENV170357304
CETJ01155977
270904
Gammaproteobacteria
CGG
Pro
>WENV170356680
CETJ01058013
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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