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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170371183
CETR01258874
218595
Alphaproteobacteria
CAA
Leu
>WENV170370071
CETR01061517
653537
Alphaproteobacteria
GGT
Thr
>WENV170370101
CETR01063764
655421
Alphaproteobacteria
GGT
Thr
>WENV170369578
CETR01017488
455289
Alphaproteobacteria
TTT
Lys
>WENV170370457
CETR01104309
456497
Alphaproteobacteria
TGT
Thr
>WENV170369609
CETR01019276
452629
Alphaproteobacteria
GAA
Phe
>WENV170370372
CETR01095083
452629
Alphaproteobacteria
GAA
Phe
>WENV170370169
CETR01070041
270887
Alphaproteobacteria
TGG
Pro
>WENV170370645
CETR01126624
780331
Alphaproteobacteria
TCC
Gly
>WENV170370548
CETR01115854
780331
Alphaproteobacteria
TCC
Gly
>WENV170369400
CETR01003918
456473
Alphaproteobacteria
GGC
Ala
>WENV170370612
CETR01123354
180423
Alphaproteobacteria
CAA
Leu
>WENV170370236
CETR01078364
656156
Alphaproteobacteria
GCC
Gly
>WENV170370789
CETR01143064
653538
Alphaproteobacteria
TTC
Glu
>WENV170370825
CETR01153574
271268
Alphaproteobacteria
CAT
Met
>WENV170370845
CETR01164661
655171
Alphaproteobacteria
GGT
Thr
>WENV170370610
CETR01123148
659897
Alphaproteobacteria
GAC
Val
>WENV170370679
CETR01130531
277664
Alphaproteobacteria
GTC
Asp
>WENV170370184
CETR01072106
451755
Alphaproteobacteria
TGC
Ala
>WENV170370147
CETR01067655
219139
Alphaproteobacteria
TAG
Leu
>WENV170370105
CETR01064539
277700
Alphaproteobacteria
GTG
His
>WENV170369657
CETR01023446
655849
Alphaproteobacteria
TTG
Gln
>WENV170370614
CETR01123497
451742
Alphaproteobacteria
GGC
Ala
>WENV170370568
CETR01119213
653532
Alphaproteobacteria
GTT
Asn
>WENV170369672
CETR01024498
19999
Alphaproteobacteria
GCT
Ser
>WENV170369851
CETR01039415
274144
Alphaproteobacteria
GTG
His
>WENV170370702
CETR01131918
274144
Alphaproteobacteria
GTG
His
>WENV170369771
CETR01032325
455172
Alphaproteobacteria
GGC
Ala
>WENV170370438
CETR01102466
276089
Alphaproteobacteria
CCG
Arg
>WENV170369692
CETR01025856
273450
Alphaproteobacteria
TCT
Arg
>WENV170370572
CETR01119898
779636
Alphaproteobacteria
CTG
Gln
>WENV170370711
CETR01132749
454059
Alphaproteobacteria
TTT
Lys
>WENV170369622
CETR01020515
274138
Alphaproteobacteria
CAT
Met
>WENV170369448
CETR01007481
113188
Alphaproteobacteria
GAG
Leu
>WENV170370787
CETR01141670
655166
Alphaproteobacteria
CAC
Val
>WENV170370678
CETR01130403
454512
Alphaproteobacteria
CCA
Trp
>WENV170369829
CETR01037600
454512
Alphaproteobacteria
CCA
Trp
>WENV170369464
CETR01008896
454056
Alphaproteobacteria
CGT
Thr
>WENV170370580
CETR01120399
275204
Alphaproteobacteria
ACG
Arg
>WENV170370493
CETR01108000
655361
Alphaproteobacteria
GCC
Gly
>WENV170369443
CETR01007238
655361
Alphaproteobacteria
GCC
Gly
>WENV170369574
CETR01017260
656140
Alphaproteobacteria
GAC
Val
>WENV170369391
CETR01002971
461047
Alphaproteobacteria
CCA
Trp
>WENV170369859
CETR01040396
270791
Alphaproteobacteria
CAT
Met
>WENV170370861
CETR01169477
112429
Alphaproteobacteria
GAG
Leu
>WENV170370312
CETR01087163
281027
Alphaproteobacteria
CCT
Arg
>WENV170369918
CETR01046351
112839
Alphaproteobacteria
CAG
Leu
>WENV170370950
CETR01200343
320024
Alphaproteobacteria
CCT
Arg
>WENV170370611
CETR01123172
301299
Alphaproteobacteria
CCG
Arg
>WENV170370358
CETR01092275
653539
Alphaproteobacteria
GAC
Val
>WENV170371003
CETR01219561
654995
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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