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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170444874
CEUY01008626
275457
Gammaproteobacteria
ACG
Arg
>WENV170444970
CEUY01013821
275457
Gammaproteobacteria
ACG
Arg
>WENV170444971
CEUY01013821
275457
Gammaproteobacteria
ACG
Arg
>WENV170444972
CEUY01013821
275457
Gammaproteobacteria
ACG
Arg
>WENV170445165
CEUY01023289
274864
Gammaproteobacteria
ACG
Arg
>WENV170445602
CEUY01050417
180704
Gammaproteobacteria
CAA
Leu
>WENV170445589
CEUY01048751
113737
Gammaproteobacteria
CAA
Leu
>WENV170445352
CEUY01035343
113485
Gammaproteobacteria
CAA
Leu
>WENV170446462
CEUY01133963
112371
Gammaproteobacteria
CAA
Leu
>WENV170444956
CEUY01013069
271254
Gammaproteobacteria
CAT
Met
>WENV170445422
CEUY01039542
451779
Gammaproteobacteria
CAT
Met
>WENV170446833
CEUY01170859
271200
Gammaproteobacteria
CAT
Met
>WENV170447967
CEUY01461295
270692
Gammaproteobacteria
CAT
Met
>WENV170446642
CEUY01151241
454808
Gammaproteobacteria
CAT
Met
>WENV170445417
CEUY01039229
276972
Gammaproteobacteria
CCA
Trp
>WENV170445692
CEUY01058080
276972
Gammaproteobacteria
CCA
Trp
>WENV170446945
CEUY01181511
270666
Gammaproteobacteria
CCA
Trp
>WENV170447083
CEUY01191635
780765
Gammaproteobacteria
CCC
Gly
>WENV170445418
CEUY01039423
273698
Gammaproteobacteria
CCG
Arg
>WENV170445224
CEUY01028089
278982
Gammaproteobacteria
CCG
Arg
>WENV170447807
CEUY01400529
270824
Gammaproteobacteria
CCT
Arg
>WENV170446410
CEUY01126090
271460
Gammaproteobacteria
CGG
Pro
>WENV170445937
CEUY01080642
464809
Gammaproteobacteria
GAA
Phe
>WENV170447804
CEUY01399950
297860
Gammaproteobacteria
GAC
Val
>WENV170447395
CEUY01205979
276973
Gammaproteobacteria
GAC
Val
>WENV170444855
CEUY01007273
218020
Gammaproteobacteria
GAG
Leu
>WENV170445714
CEUY01059968
270982
Gammaproteobacteria
GAT
Ile
>WENV170444823
CEUY01005253
275791
Gammaproteobacteria
GAT
Ile
>WENV170444849
CEUY01006835
779604
Gammaproteobacteria
GCA
Cys
>WENV170445409
CEUY01038355
779470
Gammaproteobacteria
GCA
Cys
>WENV170445185
CEUY01025214
779470
Gammaproteobacteria
GCA
Cys
>WENV170445540
CEUY01046380
452412
Gammaproteobacteria
GCC
Gly
>WENV170444848
CEUY01006835
452412
Gammaproteobacteria
GCC
Gly
>WENV170445906
CEUY01077729
30792
Gammaproteobacteria
GGA
Ser
>WENV170446322
CEUY01116495
457459
Gammaproteobacteria
GGC
Ala
>WENV170445059
CEUY01019097
271458
Gammaproteobacteria
GGG
Pro
>WENV170445537
CEUY01046257
467367
Gammaproteobacteria
GGT
Thr
>WENV170445797
CEUY01068113
271613
Gammaproteobacteria
GTC
Asp
>WENV170445893
CEUY01077154
452415
Gammaproteobacteria
GTG
His
>WENV170447997
CEUY01469133
456269
Gammaproteobacteria
GTG
His
>WENV170445335
CEUY01034212
452332
Gammaproteobacteria
GTG
His
>WENV170447312
CEUY01204073
457171
Gammaproteobacteria
GTT
Asn
>WENV170447245
CEUY01201049
451783
Gammaproteobacteria
GTT
Asn
>WENV170445318
CEUY01033407
180152
Gammaproteobacteria
TAG
Leu
>WENV170448024
CEUY01473289
270689
Gammaproteobacteria
TCG
Arg
>WENV170447331
CEUY01204642
270815
Gammaproteobacteria
TCT
Arg
>WENV170445288
CEUY01031929
30509
Gammaproteobacteria
TGA
Ser
>WENV170445255
CEUY01029655
271464
Gammaproteobacteria
TGG
Pro
>WENV170447168
CEUY01197021
301313
Gammaproteobacteria
TGG
Pro
>WENV170445562
CEUY01047263
276975
Gammaproteobacteria
TGG
Pro
>WENV170447134
CEUY01194321
456706
Gammaproteobacteria
TGT
Thr
>WENV170445118
CEUY01021346
452404
Gammaproteobacteria
TGT
Thr
>WENV170445822
CEUY01070962
452414
Gammaproteobacteria
TTC
Glu
>WENV170445205
CEUY01026911
452416
Gammaproteobacteria
TTT
Lys
>WENV170445206
CEUY01026911
452416
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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