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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170520855
CEWF01021059
218119
Alphaproteobacteria
>WENV170520788
CEWF01012038
274133
Alphaproteobacteria
ACG
Arg
>WENV170521273
CEWF01146295
655166
Alphaproteobacteria
CAC
Val
>WENV170521312
CEWF01150094
154064
Alphaproteobacteria
CAG
Leu
>WENV170520843
CEWF01020627
112839
Alphaproteobacteria
CAG
Leu
>WENV170520809
CEWF01014707
452884
Alphaproteobacteria
CCA
Trp
>WENV170520741
CEWF01005289
780326
Alphaproteobacteria
CCC
Gly
>WENV170521134
CEWF01091544
301299
Alphaproteobacteria
CCG
Arg
>WENV170520922
CEWF01034298
46070
Alphaproteobacteria
CGA
Ser
>WENV170520765
CEWF01008624
274130
Alphaproteobacteria
CGG
Pro
>WENV170520887
CEWF01027016
654103
Alphaproteobacteria
GAA
Phe
>WENV170520828
CEWF01018592
655359
Alphaproteobacteria
GAC
Val
>WENV170520853
CEWF01021059
653534
Alphaproteobacteria
GCC
Gly
>WENV170520854
CEWF01021059
653534
Alphaproteobacteria
GCC
Gly
>WENV170521203
CEWF01126542
19999
Alphaproteobacteria
GCT
Ser
>WENV170520847
CEWF01020792
46069
Alphaproteobacteria
GGA
Ser
>WENV170520825
CEWF01017539
451742
Alphaproteobacteria
GGC
Ala
>WENV170520845
CEWF01020741
273797
Alphaproteobacteria
GGG
Pro
>WENV170521227
CEWF01135126
655171
Alphaproteobacteria
GGT
Thr
>WENV170520866
CEWF01022984
270796
Alphaproteobacteria
GTC
Asp
>WENV170520865
CEWF01022984
270796
Alphaproteobacteria
GTC
Asp
>WENV170520753
CEWF01006108
274127
Alphaproteobacteria
GTG
His
>WENV170520804
CEWF01013627
653532
Alphaproteobacteria
GTT
Asn
>WENV170520861
CEWF01022705
452917
Alphaproteobacteria
TAC
Val
>WENV170521211
CEWF01129188
218137
Alphaproteobacteria
TAG
Leu
>WENV170521284
CEWF01147727
274132
Alphaproteobacteria
TGG
Pro
>WENV170520844
CEWF01020661
655167
Alphaproteobacteria
TTC
Glu
>WENV170521048
CEWF01055130
655358
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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