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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180028394
FTJA01187099
273448
Alphaproteobacteria
CGG
Pro
>WENV180028142
FTJA01000040
465568
Alphaproteobacteria
GGC
Ala
>WENV180028315
FTJA01075198
465568
Alphaproteobacteria
GGC
Ala
>WENV180028386
FTJA01176685
465568
Alphaproteobacteria
GGC
Ala
>WENV180028393
FTJA01187077
465568
Alphaproteobacteria
GGC
Ala
>WENV180028457
FTJA01594535
113204
Alphaproteobacteria
GAG
Leu
>WENV180028201
FTJA01003181
660487
Alphaproteobacteria
GCC
Gly
>WENV180028294
FTJA01056760
270880
Alphaproteobacteria
GGG
Pro
>WENV180028336
FTJA01105455
270880
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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