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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170850614
MDTA01117343
275828
Alphaproteobacteria
GTC
Asp
>WENV170852701
MDTA01155572
655421
Alphaproteobacteria
GGT
Thr
>WENV170844775
MDTA01012015
273805
Alphaproteobacteria
ACG
Arg
>WENV170850960
MDTA01123837
273805
Alphaproteobacteria
ACG
Arg
>WENV170848540
MDTA01080959
218119
Alphaproteobacteria
>WENV170855095
MDTA01200452
451759
Alphaproteobacteria
TTT
Lys
>WENV170847000
MDTA01052403
274224
Alphaproteobacteria
CAT
Met
>WENV170846063
MDTA01035609
49736
Alphaproteobacteria
TGA
Ser
>WENV170845181
MDTA01019305
452894
Alphaproteobacteria
CCA
Trp
>WENV170854837
MDTA01195662
653532
Alphaproteobacteria
GTT
Asn
>WENV170854796
MDTA01195135
47329
Alphaproteobacteria
TGA
Ser
>WENV170853879
MDTA01178305
454059
Alphaproteobacteria
TTT
Lys
>WENV170854343
MDTA01187249
456892
Alphaproteobacteria
CGC
Ala
>WENV170851163
MDTA01126988
455360
Alphaproteobacteria
CGC
Ala
>WENV170855763
MDTA01212364
273603
Alphaproteobacteria
TGG
Pro
>WENV170856233
MDTA01219863
273603
Alphaproteobacteria
TGG
Pro
>WENV170854128
MDTA01183233
271956
Alphaproteobacteria
CAT
Met
>WENV170849774
MDTA01102142
455436
Alphaproteobacteria
TTC
Glu
>WENV170845998
MDTA01034498
454318
Alphaproteobacteria
GGC
Ala
>WENV170848719
MDTA01083766
454318
Alphaproteobacteria
GGC
Ala
>WENV170855074
MDTA01200033
113889
Alphaproteobacteria
CAG
Leu
>WENV170855957
MDTA01215582
780582
Alphaproteobacteria
TCC
Gly
>WENV170848044
MDTA01072102
270880
Alphaproteobacteria
GGG
Pro
>WENV170855497
MDTA01206889
779596
Alphaproteobacteria
TCC
Gly
>WENV170855788
MDTA01212758
654995
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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