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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180079190
MPMB02148174
271464
Gammaproteobacteria
TGG
Pro
>WENV180076604
MPMB02005580
270982
Gammaproteobacteria
GAT
Ile
>WENV180078122
MPMB02086581
270982
Gammaproteobacteria
GAT
Ile
>WENV180076839
MPMB02017238
272023
Gammaproteobacteria
GAT
Ile
>WENV180079938
MPMB02194629
272023
Gammaproteobacteria
GAT
Ile
>WENV180079945
MPMB02195011
272023
Gammaproteobacteria
GAT
Ile
>WENV180077197
MPMB02035533
275934
Gammaproteobacteria
GGG
Pro
>WENV180078717
MPMB02122392
780765
Gammaproteobacteria
CCC
Gly
>WENV180077508
MPMB02053700
780764
Gammaproteobacteria
TCC
Gly
>WENV180077609
MPMB02060161
466510
Gammaproteobacteria
GCC
Gly
>WENV180077170
MPMB02034771
466510
Gammaproteobacteria
GCC
Gly
>WENV180079946
MPMB02195011
466186
Gammaproteobacteria
TGC
Ala
>WENV180079939
MPMB02194629
466186
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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