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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171002434
NHNJ01042636
273797
Alphaproteobacteria
GGG
Pro
>WENV171002515
NHNJ01073085
49026
Alphaproteobacteria
GGA
Ser
>WENV171002425
NHNJ01041767
452884
Alphaproteobacteria
CCA
Trp
>WENV171002617
NHNJ01101502
452884
Alphaproteobacteria
CCA
Trp
>WENV171002381
NHNJ01014798
656001
Alphaproteobacteria
GCC
Gly
>WENV171002445
NHNJ01043568
218119
Alphaproteobacteria
>WENV171002525
NHNJ01080650
218119
Alphaproteobacteria
>WENV171002594
NHNJ01092736
274223
Alphaproteobacteria
CCG
Arg
>WENV171002438
NHNJ01043134
274223
Alphaproteobacteria
CCG
Arg
>WENV171002666
NHNJ01130281
180720
Alphaproteobacteria
TAG
Leu
>WENV171002433
NHNJ01042606
180720
Alphaproteobacteria
TAG
Leu
>WENV171002647
NHNJ01116033
46072
Alphaproteobacteria
GCT
Ser
>WENV171002501
NHNJ01063756
46072
Alphaproteobacteria
GCT
Ser
>WENV171002472
NHNJ01049232
274133
Alphaproteobacteria
ACG
Arg
>WENV171002358
NHNJ01005743
656140
Alphaproteobacteria
GAC
Val
>WENV171002554
NHNJ01084650
780582
Alphaproteobacteria
TCC
Gly
>WENV171002580
NHNJ01089226
780582
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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