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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09000047
ABSN01002188
239252
Betaproteobacteria
TTT
Lys
>ENV09000032
ABSN01001708
400411
Betaproteobacteria
GGT
Thr
>ENV09000277
ABSN01042775
147332
Betaproteobacteria
CAT
Met
>ENV09000418
ABSN01066352
147332
Betaproteobacteria
CAT
Met
>ENV09000386
ABSN01062475
147666
Betaproteobacteria
CAT
Met
>ENV09000086
ABSN01006905
304536
Betaproteobacteria
TGT
Thr
>ENV09000119
ABSN01014228
304536
Betaproteobacteria
TGT
Thr
>ENV09000186
ABSN01026159
95723
Betaproteobacteria
CAG
Leu
>ENV09000087
ABSN01006905
95620
Betaproteobacteria
GTA
Tyr
>ENV09000120
ABSN01014228
95620
Betaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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