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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100693
AEWW01014613
148165
Gammaproteobacteria
GAC
Val
>WENV170000335
AEWW01014613
148165
Gammaproteobacteria
GAC
Val
>WENV11100645
AEWW01004023
235915
Gammaproteobacteria
TGT
Thr
>WENV170000287
AEWW01004023
235915
Gammaproteobacteria
TGT
Thr
>WENV11100747
AEWW01024721
109444
Gammaproteobacteria
GTA
Tyr
>WENV170000389
AEWW01024721
109444
Gammaproteobacteria
GTA
Tyr
>WENV11100686
AEWW01011962
45162
Gammaproteobacteria
GGA
Ser
>WENV170000328
AEWW01011962
45162
Gammaproteobacteria
GGA
Ser
>WENV11100650
AEWW01004243
95704
Gammaproteobacteria
GTA
Tyr
>WENV11100651
AEWW01004243
95704
Gammaproteobacteria
GTA
Tyr
>WENV170000292
AEWW01004243
95704
Gammaproteobacteria
GTA
Tyr
>WENV170000293
AEWW01004243
95704
Gammaproteobacteria
GTA
Tyr
>WENV11100630
AEWW01002069
315638
Gammaproteobacteria
TAC
Val
>WENV11100751
AEWW01025033
315638
Gammaproteobacteria
TAC
Val
>WENV170000272
AEWW01002069
315638
Gammaproteobacteria
TAC
Val
>WENV170000393
AEWW01025033
315638
Gammaproteobacteria
TAC
Val
>WENV11100696
AEWW01014830
277969
Gammaproteobacteria
GAA
Phe
>WENV170000338
AEWW01014830
277969
Gammaproteobacteria
GAA
Phe
>WENV11100712
AEWW01016985
165914
Gammaproteobacteria
GGG
Pro
>WENV170000354
AEWW01016985
165914
Gammaproteobacteria
GGG
Pro
>WENV11100690
AEWW01013356
413604
Gammaproteobacteria
GCA
Cys
>WENV170000332
AEWW01013356
413604
Gammaproteobacteria
GCA
Cys
>WENV11100653
AEWW01004558
173286
Gammaproteobacteria
GGG
Pro
>WENV170000295
AEWW01004558
173286
Gammaproteobacteria
GGG
Pro
>WENV11100702
AEWW01015594
58861
Gammaproteobacteria
GAG
Leu
>WENV170000344
AEWW01015594
58861
Gammaproteobacteria
GAG
Leu
>WENV11100674
AEWW01010319
199276
Gammaproteobacteria
TCT
Arg
>WENV170000316
AEWW01010319
199276
Gammaproteobacteria
TCT
Arg
>WENV11100695
AEWW01014642
314760
Gammaproteobacteria
CAT
Met
>WENV170000337
AEWW01014642
314760
Gammaproteobacteria
CAT
Met
>WENV11100790
AEWW01029955
58733
Gammaproteobacteria
>WENV170000432
AEWW01029955
58733
Gammaproteobacteria
>WENV11100810
AEWW01034683
145502
Gammaproteobacteria
TCT
Arg
>WENV170000452
AEWW01034683
145502
Gammaproteobacteria
TCT
Arg
>WENV11100827
AEWW01039273
3451
Gammaproteobacteria
>WENV170000469
AEWW01039273
3451
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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