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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014257
AXCI01003332
350432
Gammaproteobacteria
GTG
His
>WENV170014290
AXCI01004520
350432
Gammaproteobacteria
GTG
His
>WENV170014291
AXCI01004520
350432
Gammaproteobacteria
GTG
His
>WENV170014196
AXCI01000454
152460
Gammaproteobacteria
GGG
Pro
>WENV170014223
AXCI01002337
152460
Gammaproteobacteria
GGG
Pro
>WENV170014294
AXCI01004561
152460
Gammaproteobacteria
GGG
Pro
>WENV170014220
AXCI01002177
283840
Gammaproteobacteria
TTC
Glu
>WENV170014235
AXCI01002600
283840
Gammaproteobacteria
TTC
Glu
>WENV170014240
AXCI01002940
283840
Gammaproteobacteria
TTC
Glu
>WENV170014242
AXCI01002940
283840
Gammaproteobacteria
TTC
Glu
>WENV170014188
AXCI01000286
199984
Gammaproteobacteria
CAT
Met
>WENV170014194
AXCI01000405
199984
Gammaproteobacteria
CAT
Met
>WENV170014207
AXCI01000658
199984
Gammaproteobacteria
CAT
Met
>WENV170014210
AXCI01001121
199984
Gammaproteobacteria
CAT
Met
>WENV170014253
AXCI01003297
199984
Gammaproteobacteria
CAT
Met
>WENV170014272
AXCI01003964
199984
Gammaproteobacteria
CAT
Met
>WENV170014258
AXCI01003336
47425
Gammaproteobacteria
GGA
Ser
>WENV170014262
AXCI01003574
147114
Gammaproteobacteria
CCT
Arg
>WENV170014264
AXCI01003636
147114
Gammaproteobacteria
CCT
Arg
>WENV170014267
AXCI01003783
147114
Gammaproteobacteria
CCT
Arg
>WENV170014202
AXCI01000480
301997
Gammaproteobacteria
TTC
Glu
>WENV170014239
AXCI01002669
59172
Gammaproteobacteria
CAA
Leu
>WENV170014269
AXCI01003832
59172
Gammaproteobacteria
CAA
Leu
>WENV170014246
AXCI01003170
268812
Gammaproteobacteria
GTT
Asn
>WENV170014247
AXCI01003171
268812
Gammaproteobacteria
GTT
Asn
>WENV170014295
AXCI01004570
268812
Gammaproteobacteria
GTT
Asn
>WENV170014296
AXCI01004570
268812
Gammaproteobacteria
GTT
Asn
>WENV170014248
AXCI01003241
147118
Gammaproteobacteria
GAC
Val
>WENV170014249
AXCI01003241
147118
Gammaproteobacteria
GAC
Val
>WENV170014297
AXCI01004587
147118
Gammaproteobacteria
GAC
Val
>WENV170014298
AXCI01004587
147118
Gammaproteobacteria
GAC
Val
>WENV170014198
AXCI01000477
113688
Gammaproteobacteria
GTA
Tyr
>WENV170014243
AXCI01002990
113688
Gammaproteobacteria
GTA
Tyr
>WENV170014236
AXCI01002623
16396
Gammaproteobacteria
TGA
Ser
>WENV170014255
AXCI01003332
146807
Gammaproteobacteria
TCT
Arg
>WENV170014289
AXCI01004520
146807
Gammaproteobacteria
TCT
Arg
>WENV170014185
AXCI01000042
147120
Gammaproteobacteria
CGG
Pro
>WENV170014273
AXCI01003967
147120
Gammaproteobacteria
CGG
Pro
>WENV170014189
AXCI01000390
237438
Gammaproteobacteria
GAA
Phe
>WENV170014292
AXCI01004540
237438
Gammaproteobacteria
GAA
Phe
>WENV170014225
AXCI01002339
147117
Gammaproteobacteria
GTC
Asp
>WENV170014226
AXCI01002339
147117
Gammaproteobacteria
GTC
Asp
>WENV170014232
AXCI01002455
147328
Gammaproteobacteria
CCG
Arg
>WENV170014271
AXCI01003904
147328
Gammaproteobacteria
CCG
Arg
>WENV170014280
AXCI01004094
147328
Gammaproteobacteria
CCG
Arg
>WENV170014231
AXCI01002450
158083
Gammaproteobacteria
ACG
Arg
>WENV170014277
AXCI01004048
158083
Gammaproteobacteria
ACG
Arg
>WENV170014278
AXCI01004048
158083
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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