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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016163
AZIJ01013754
236929
Bacteroidota
TTT
Lys
>WENV170016076
AZIJ01011985
165001
Bacteroidota
GTT
Asn
>WENV170016082
AZIJ01012125
139286
Bacteroidota
TGG
Pro
>WENV170016047
AZIJ01009984
309582
Bacteroidota
TTT
Lys
>WENV170015917
AZIJ01004192
103881
Bacteroidota
TAG
Leu
>WENV170015902
AZIJ01003498
338625
Bacteroidota
TTC
Glu
>WENV170015901
AZIJ01003423
127458
Bacteroidota
GAC
Val
>WENV170016176
AZIJ01014507
127458
Bacteroidota
GAC
Val
>WENV170015826
AZIJ01000391
151930
Bacteroidota
CAT
Met
>WENV170015936
AZIJ01004690
238553
Bacteroidota
GAA
Phe
>WENV170016300
AZIJ01022391
152188
Bacteroidota
GGC
Ala
>WENV170016081
AZIJ01012125
59930
Bacteroidota
GCT
Ser
>WENV170016210
AZIJ01016634
97383
Bacteroidota
CAA
Leu
>WENV170016298
AZIJ01022009
97383
Bacteroidota
CAA
Leu
>WENV170015839
AZIJ01000803
193627
Bacteroidota
TCT
Arg
>WENV170016008
AZIJ01007505
150454
Bacteroidota
TGT
Thr
>WENV170016083
AZIJ01012125
145408
Bacteroidota
TCT
Arg
>WENV170016012
AZIJ01007816
255845
Bacteroidota
>WENV170015850
AZIJ01001408
45130
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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