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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170131705
CENT01001412
369678
Alphaproteobacteria
GGT
Thr
>WENV170131734
CENT01003037
160158
Alphaproteobacteria
GAT
Ile
>WENV170131986
CENT01024440
338282
Alphaproteobacteria
GTT
Asn
>WENV170132107
CENT01037426
161002
Alphaproteobacteria
GTG
His
>WENV170132244
CENT01051099
339360
Alphaproteobacteria
>WENV170132284
CENT01055140
306070
Alphaproteobacteria
CCA
Trp
>WENV170132310
CENT01057580
59118
Alphaproteobacteria
CAG
Leu
>WENV170132393
CENT01066223
109657
Alphaproteobacteria
TAG
Leu
>WENV170132421
CENT01069227
237479
Alphaproteobacteria
TTT
Lys
>WENV170132570
CENT01085156
23611
Alphaproteobacteria
CGA
Ser
>WENV170132579
CENT01085865
129295
Alphaproteobacteria
GGG
Pro
>WENV170132609
CENT01089353
161002
Alphaproteobacteria
GTG
His
>WENV170132652
CENT01093449
147088
Alphaproteobacteria
CCT
Arg
>WENV170132653
CENT01093480
282595
Alphaproteobacteria
CCA
Trp
>WENV170132704
CENT01096977
113700
Alphaproteobacteria
>WENV170132720
CENT01097564
435528
Alphaproteobacteria
GCA
Cys
>WENV170132735
CENT01102278
242540
Alphaproteobacteria
TGC
Ala
>WENV170132772
CENT01118661
259072
Alphaproteobacteria
CGC
Ala
>WENV170132831
CENT01141097
339465
Alphaproteobacteria
GGT
Thr
>WENV170132914
CENT01170027
154227
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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