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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170175786
CEOS01007794
266918
Actinomycetota
GCC
Gly
>WENV170177136
CEOS01199971
45128
Actinomycetota
GGA
Ser
>WENV170176298
CEOS01059147
95968
Actinomycetota
TAG
Leu
>WENV170176526
CEOS01088100
259567
Actinomycetota
CTT
Lys
>WENV170175782
CEOS01007346
148837
Actinomycetota
CAT
Met
>WENV170176175
CEOS01048555
95931
Actinomycetota
GTA
Tyr
>WENV170176096
CEOS01038350
236214
Actinomycetota
CCA
Trp
>WENV170177262
CEOS01233065
254605
Actinomycetota
TAA
Leu
>WENV170176200
CEOS01050201
24115
Actinomycetota
CGA
Ser
>WENV170176670
CEOS01108374
24115
Actinomycetota
CGA
Ser
>WENV170176305
CEOS01060912
237593
Actinomycetota
GTT
Asn
>WENV170175742
CEOS01003165
246365
Actinomycetota
ACG
Arg
>WENV170176456
CEOS01079164
237559
Actinomycetota
GTG
His
>WENV170177189
CEOS01220277
251503
Actinomycetota
GTT
Asn
>WENV170176380
CEOS01070297
179547
Actinomycetota
GGG
Pro
>WENV170176291
CEOS01057741
268346
Actinomycetota
GGC
Ala
>WENV170176318
CEOS01062990
268346
Actinomycetota
GGC
Ala
>WENV170176788
CEOS01123279
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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