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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170186067
CEPA01015630
267922
Alphaproteobacteria
CCA
Trp
>WENV170185989
CEPA01010367
144964
Alphaproteobacteria
TGG
Pro
>WENV170186304
CEPA01033536
23468
Alphaproteobacteria
GCT
Ser
>WENV170187666
CEPA01185197
257573
Alphaproteobacteria
GAA
Phe
>WENV170186958
CEPA01102393
338282
Alphaproteobacteria
GTT
Asn
>WENV170187114
CEPA01122561
338282
Alphaproteobacteria
GTT
Asn
>WENV170187847
CEPA01293561
243897
Alphaproteobacteria
TGC
Ala
>WENV170187029
CEPA01111717
339722
Alphaproteobacteria
TTG
Gln
>WENV170186743
CEPA01079046
281594
Alphaproteobacteria
TGT
Thr
>WENV170186960
CEPA01102677
283763
Alphaproteobacteria
TGC
Ala
>WENV170187505
CEPA01165792
258175
Alphaproteobacteria
CGC
Ala
>WENV170186566
CEPA01061342
23672
Alphaproteobacteria
GCT
Ser
>WENV170186128
CEPA01020989
167926
Alphaproteobacteria
CAT
Met
>WENV170187132
CEPA01123976
167926
Alphaproteobacteria
CAT
Met
>WENV170186311
CEPA01034438
412477
Alphaproteobacteria
GCA
Cys
>WENV170186383
CEPA01042722
160158
Alphaproteobacteria
GAT
Ile
>WENV170186751
CEPA01080372
412424
Alphaproteobacteria
TCC
Gly
>WENV170186396
CEPA01044550
150356
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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