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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170264058
CERD01001268
188516
Gammaproteobacteria
CAT
Met
>WENV170264077
CERD01002653
58767
Gammaproteobacteria
CAG
Leu
>WENV170264092
CERD01004680
62553
Gammaproteobacteria
TAA
Leu
>WENV170264096
CERD01005109
147776
Gammaproteobacteria
ACG
Arg
>WENV170264097
CERD01005109
147776
Gammaproteobacteria
ACG
Arg
>WENV170264098
CERD01005109
147776
Gammaproteobacteria
ACG
Arg
>WENV170264112
CERD01005692
411735
Gammaproteobacteria
GCA
Cys
>WENV170264113
CERD01005699
145367
Gammaproteobacteria
GGG
Pro
>WENV170264114
CERD01006056
16394
Gammaproteobacteria
TGA
Ser
>WENV170264135
CERD01007209
241230
Gammaproteobacteria
GAA
Phe
>WENV170264142
CERD01007676
160030
Gammaproteobacteria
GGG
Pro
>WENV170264153
CERD01008945
152317
Gammaproteobacteria
CAT
Met
>WENV170264162
CERD01010623
23429
Gammaproteobacteria
GGA
Ser
>WENV170264163
CERD01010656
147057
Gammaproteobacteria
GAC
Val
>WENV170264164
CERD01010738
16394
Gammaproteobacteria
TGA
Ser
>WENV170264187
CERD01012458
411735
Gammaproteobacteria
GCA
Cys
>WENV170264204
CERD01013946
262546
Gammaproteobacteria
TGC
Ala
>WENV170264207
CERD01014173
147048
Gammaproteobacteria
CCA
Trp
>WENV170264211
CERD01014780
237159
Gammaproteobacteria
GTG
His
>WENV170264223
CERD01015760
240619
Gammaproteobacteria
TGT
Thr
>WENV170264260
CERD01018653
339596
Gammaproteobacteria
CCT
Arg
>WENV170264264
CERD01018821
243921
Gammaproteobacteria
TTT
Lys
>WENV170264265
CERD01018821
243921
Gammaproteobacteria
TTT
Lys
>WENV170264278
CERD01020080
59658
Gammaproteobacteria
CAA
Leu
>WENV170264284
CERD01021204
262546
Gammaproteobacteria
TGC
Ala
>WENV170264289
CERD01021529
146807
Gammaproteobacteria
TCT
Arg
>WENV170264301
CERD01023015
59177
Gammaproteobacteria
TAA
Leu
>WENV170264300
CERD01023015
426787
Gammaproteobacteria
GCA
Cys
>WENV170264323
CERD01025890
340801
Gammaproteobacteria
CCT
Arg
>WENV170264338
CERD01026018
276072
Gammaproteobacteria
>WENV170264342
CERD01026105
174801
Gammaproteobacteria
TGG
Pro
>WENV170264377
CERD01029169
236480
Gammaproteobacteria
GTG
His
>WENV170264379
CERD01029607
149038
Gammaproteobacteria
TGG
Pro
>WENV170264392
CERD01030509
268812
Gammaproteobacteria
GTT
Asn
>WENV170264400
CERD01030970
152301
Gammaproteobacteria
GAT
Ile
>WENV170264421
CERD01032747
145261
Gammaproteobacteria
CAT
Met
>WENV170264491
CERD01037727
175964
Gammaproteobacteria
CAT
Met
>WENV170264511
CERD01040050
276072
Gammaproteobacteria
>WENV170264547
CERD01044042
262546
Gammaproteobacteria
TGC
Ala
>WENV170264569
CERD01046293
188516
Gammaproteobacteria
CAT
Met
>WENV170264602
CERD01049036
160030
Gammaproteobacteria
GGG
Pro
>WENV170264626
CERD01052156
411735
Gammaproteobacteria
GCA
Cys
>WENV170264634
CERD01052356
173617
Gammaproteobacteria
GTC
Asp
>WENV170264647
CERD01053739
145369
Gammaproteobacteria
CGG
Pro
>WENV170264694
CERD01060634
166654
Gammaproteobacteria
GAC
Val
>WENV170264695
CERD01060634
195986
Gammaproteobacteria
GAC
Val
>WENV170264713
CERD01061173
147117
Gammaproteobacteria
GTC
Asp
>WENV170264719
CERD01062282
266766
Gammaproteobacteria
TGT
Thr
>WENV170264753
CERD01066277
147778
Gammaproteobacteria
GGG
Pro
>WENV170264759
CERD01067027
188516
Gammaproteobacteria
CAT
Met
>WENV170264851
CERD01077132
113688
Gammaproteobacteria
GTA
Tyr
>WENV170264857
CERD01077894
149073
Gammaproteobacteria
CAT
Met
>WENV170264894
CERD01082029
16394
Gammaproteobacteria
TGA
Ser
>WENV170264940
CERD01088536
147112
Gammaproteobacteria
GGG
Pro
>WENV170264966
CERD01093345
340801
Gammaproteobacteria
CCT
Arg
>WENV170264968
CERD01093519
421020
Gammaproteobacteria
GCA
Cys
>WENV170264993
CERD01097106
128930
Gammaproteobacteria
GTC
Asp
>WENV170265004
CERD01098219
149036
Gammaproteobacteria
CCA
Trp
>WENV170265026
CERD01100604
183605
Gammaproteobacteria
CCG
Arg
>WENV170265098
CERD01108519
160030
Gammaproteobacteria
GGG
Pro
>WENV170265249
CERD01123434
20025
Gammaproteobacteria
GGA
Ser
>WENV170265250
CERD01123434
149037
Gammaproteobacteria
GAC
Val
>WENV170265271
CERD01125072
58815
Gammaproteobacteria
CAA
Leu
>WENV170265298
CERD01126772
24435
Gammaproteobacteria
CGA
Ser
>WENV170265312
CERD01127297
266766
Gammaproteobacteria
TGT
Thr
>WENV170265319
CERD01127567
279385
Gammaproteobacteria
TTT
Lys
>WENV170265323
CERD01127628
24434
Gammaproteobacteria
TGA
Ser
>WENV170265565
CERD01221312
250885
Gammaproteobacteria
TGC
Ala
>WENV170265589
CERD01225928
241136
Gammaproteobacteria
TTG
Gln
>WENV170265591
CERD01226068
147114
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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