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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170269009
CERH01022441
381459
Alphaproteobacteria
CAC
Val
>WENV170269138
CERH01054786
237493
Alphaproteobacteria
CCA
Trp
>WENV170269167
CERH01061753
237739
Alphaproteobacteria
CGT
Thr
>WENV170269234
CERH01076948
238733
Alphaproteobacteria
CCA
Trp
>WENV170269031
CERH01027275
34696
Alphaproteobacteria
GGA
Ser
>WENV170269037
CERH01028490
147089
Alphaproteobacteria
ACG
Arg
>WENV170268892
CERH01001377
10665
Alphaproteobacteria
GCT
Ser
>WENV170269033
CERH01028023
113700
Alphaproteobacteria
>WENV170269184
CERH01066611
113700
Alphaproteobacteria
>WENV170269114
CERH01049519
395846
Alphaproteobacteria
GAC
Val
>WENV170269069
CERH01034935
109657
Alphaproteobacteria
TAG
Leu
>WENV170269232
CERH01076491
338283
Alphaproteobacteria
CAC
Val
>WENV170269312
CERH01091038
282595
Alphaproteobacteria
CCA
Trp
>WENV170268998
CERH01020874
339724
Alphaproteobacteria
TTG
Gln
>WENV170269356
CERH01119777
421153
Alphaproteobacteria
>WENV170269284
CERH01084774
23671
Alphaproteobacteria
CGA
Ser
>WENV170268928
CERH01009828
338282
Alphaproteobacteria
GTT
Asn
>WENV170268942
CERH01011659
199865
Alphaproteobacteria
CAT
Met
>WENV170269307
CERH01090260
254188
Alphaproteobacteria
CCA
Trp
>WENV170268965
CERH01014754
95928
Alphaproteobacteria
TAG
Leu
>WENV170269030
CERH01026929
162801
Alphaproteobacteria
GTG
His
>WENV170269210
CERH01072849
339846
Alphaproteobacteria
GAC
Val
>WENV170269220
CERH01074661
148157
Alphaproteobacteria
CCG
Arg
>WENV170269110
CERH01047052
237740
Alphaproteobacteria
TTT
Lys
>WENV170269147
CERH01057639
80918
Alphaproteobacteria
GAG
Leu
>WENV170269244
CERH01077651
157999
Alphaproteobacteria
TCT
Arg
>WENV170269034
CERH01028023
413626
Alphaproteobacteria
TCC
Gly
>WENV170269001
CERH01021023
339725
Alphaproteobacteria
GAA
Phe
>WENV170269176
CERH01064388
192195
Alphaproteobacteria
GTC
Asp
>WENV170269366
CERH01129053
29390
Alphaproteobacteria
CGA
Ser
>WENV170268972
CERH01015904
284043
Alphaproteobacteria
CGT
Thr
>WENV170269185
CERH01066680
163860
Alphaproteobacteria
GGG
Pro
>WENV170268988
CERH01018936
147085
Alphaproteobacteria
CCG
Arg
>WENV170269294
CERH01087844
338760
Alphaproteobacteria
GAA
Phe
>WENV170269306
CERH01090260
424918
Alphaproteobacteria
TCC
Gly
>WENV170269081
CERH01038373
147087
Alphaproteobacteria
GTG
His
>WENV170269302
CERH01089503
319925
Alphaproteobacteria
TGT
Thr
>WENV170268991
CERH01019805
412281
Alphaproteobacteria
CTG
Gln
>WENV170268886
CERH01000259
369678
Alphaproteobacteria
GGT
Thr
>WENV170269061
CERH01032633
339606
Alphaproteobacteria
>WENV170269166
CERH01061016
147289
Alphaproteobacteria
GTC
Asp
>WENV170269007
CERH01022368
21074
Alphaproteobacteria
GGA
Ser
>WENV170268980
CERH01017376
191695
Alphaproteobacteria
CCT
Arg
>WENV170269368
CERH01129550
147286
Alphaproteobacteria
CGG
Pro
>WENV170269118
CERH01050139
343498
Alphaproteobacteria
GGT
Thr
>WENV170268919
CERH01008487
147088
Alphaproteobacteria
CCT
Arg
>WENV170269049
CERH01030024
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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