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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170277980
CERQ01042247
365250
Alphaproteobacteria
GCC
Gly
>WENV170278546
CERQ01109296
237493
Alphaproteobacteria
CCA
Trp
>WENV170278777
CERQ01126306
237493
Alphaproteobacteria
CCA
Trp
>WENV170278754
CERQ01125139
419488
Alphaproteobacteria
TCC
Gly
>WENV170278758
CERQ01125350
313418
Alphaproteobacteria
GGC
Ala
>WENV170277761
CERQ01020472
59361
Alphaproteobacteria
GAG
Leu
>WENV170277783
CERQ01022781
237489
Alphaproteobacteria
CAT
Met
>WENV170277653
CERQ01009408
10665
Alphaproteobacteria
GCT
Ser
>WENV170278187
CERQ01062769
146683
Alphaproteobacteria
GTG
His
>WENV170278489
CERQ01100965
339724
Alphaproteobacteria
TTG
Gln
>WENV170278822
CERQ01136691
339724
Alphaproteobacteria
TTG
Gln
>WENV170277965
CERQ01041161
256971
Alphaproteobacteria
TGT
Thr
>WENV170278698
CERQ01121139
338282
Alphaproteobacteria
GTT
Asn
>WENV170277673
CERQ01011852
239035
Alphaproteobacteria
CGC
Ala
>WENV170278487
CERQ01100502
236134
Alphaproteobacteria
TAC
Val
>WENV170277583
CERQ01003312
200119
Alphaproteobacteria
CAT
Met
>WENV170277968
CERQ01041501
338289
Alphaproteobacteria
GAC
Val
>WENV170278721
CERQ01123008
74116
Alphaproteobacteria
CAG
Leu
>WENV170277719
CERQ01016516
193197
Alphaproteobacteria
ACG
Arg
>WENV170278621
CERQ01117437
417107
Alphaproteobacteria
GCA
Cys
>WENV170278818
CERQ01133684
339725
Alphaproteobacteria
GAA
Phe
>WENV170277830
CERQ01028178
258175
Alphaproteobacteria
CGC
Ala
>WENV170278485
CERQ01100078
235427
Alphaproteobacteria
CCA
Trp
>WENV170278778
CERQ01126379
167926
Alphaproteobacteria
CAT
Met
>WENV170277813
CERQ01025951
161002
Alphaproteobacteria
GTG
His
>WENV170279019
CERQ01216748
364533
Alphaproteobacteria
GCC
Gly
>WENV170278759
CERQ01125396
130084
Alphaproteobacteria
GGG
Pro
>WENV170278637
CERQ01119044
159427
Alphaproteobacteria
GTG
His
>WENV170278957
CERQ01198516
339305
Alphaproteobacteria
GGT
Thr
>WENV170278017
CERQ01045625
237281
Alphaproteobacteria
CGT
Thr
>WENV170278591
CERQ01114213
10657
Alphaproteobacteria
GCT
Ser
>WENV170279035
CERQ01222223
80837
Alphaproteobacteria
TAA
Leu
>WENV170277821
CERQ01027005
237196
Alphaproteobacteria
CGT
Thr
>WENV170277944
CERQ01039711
23717
Alphaproteobacteria
TGA
Ser
>WENV170278501
CERQ01103252
266073
Alphaproteobacteria
TTT
Lys
>WENV170278606
CERQ01115682
23384
Alphaproteobacteria
GGA
Ser
>WENV170278050
CERQ01048634
303842
Alphaproteobacteria
TAC
Val
>WENV170278008
CERQ01045104
369678
Alphaproteobacteria
GGT
Thr
>WENV170277954
CERQ01040533
23743
Alphaproteobacteria
GCT
Ser
>WENV170277952
CERQ01040441
147289
Alphaproteobacteria
GTC
Asp
>WENV170278592
CERQ01114238
21074
Alphaproteobacteria
GGA
Ser
>WENV170277738
CERQ01018599
114040
Alphaproteobacteria
CAA
Leu
>WENV170278386
CERQ01086924
377327
Alphaproteobacteria
GCC
Gly
>WENV170277942
CERQ01039460
23572
Alphaproteobacteria
TGA
Ser
>WENV170277995
CERQ01043095
101826
Alphaproteobacteria
TAG
Leu
>WENV170278995
CERQ01208796
191695
Alphaproteobacteria
CCT
Arg
>WENV170278753
CERQ01125139
62052
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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