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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170314551
CESO01006075
144980
Gammaproteobacteria
CCG
Arg
>WENV170315432
CESO01124455
147373
Gammaproteobacteria
CAT
Met
>WENV170314983
CESO01050368
312287
Gammaproteobacteria
TGT
Thr
>WENV170315194
CESO01081249
312287
Gammaproteobacteria
TGT
Thr
>WENV170315268
CESO01094126
312287
Gammaproteobacteria
TGT
Thr
>WENV170315474
CESO01129273
312287
Gammaproteobacteria
TGT
Thr
>WENV170315177
CESO01078676
165036
Gammaproteobacteria
CCA
Trp
>WENV170315235
CESO01088448
165036
Gammaproteobacteria
CCA
Trp
>WENV170314996
CESO01052521
147048
Gammaproteobacteria
CCA
Trp
>WENV170315026
CESO01055987
249887
Gammaproteobacteria
GGT
Thr
>WENV170314661
CESO01019224
290337
Gammaproteobacteria
TAC
Val
>WENV170315284
CESO01095505
61925
Gammaproteobacteria
TAA
Leu
>WENV170315160
CESO01075936
147053
Gammaproteobacteria
GTT
Asn
>WENV170315275
CESO01094537
171935
Gammaproteobacteria
ACG
Arg
>WENV170314611
CESO01014249
235452
Gammaproteobacteria
GAA
Phe
>WENV170315444
CESO01125872
144979
Gammaproteobacteria
CGG
Pro
>WENV170315687
CESO01211679
417674
Gammaproteobacteria
GCA
Cys
>WENV170314951
CESO01047161
152455
Gammaproteobacteria
CAT
Met
>WENV170315126
CESO01069738
240642
Gammaproteobacteria
GTT
Asn
>WENV170315500
CESO01131520
240642
Gammaproteobacteria
GTT
Asn
>WENV170314860
CESO01037703
24366
Gammaproteobacteria
GGA
Ser
>WENV170314718
CESO01023383
147778
Gammaproteobacteria
GGG
Pro
>WENV170315325
CESO01106692
245602
Gammaproteobacteria
TTT
Lys
>WENV170314967
CESO01048473
146791
Gammaproteobacteria
GAC
Val
>WENV170314543
CESO01005370
322642
Gammaproteobacteria
GGT
Thr
>WENV170315715
CESO01235840
322642
Gammaproteobacteria
GGT
Thr
>WENV170315067
CESO01060954
173326
Gammaproteobacteria
TCT
Arg
>WENV170314889
CESO01040034
6976
Gammaproteobacteria
GCT
Ser
>WENV170314823
CESO01033488
202944
Gammaproteobacteria
TGG
Pro
>WENV170314998
CESO01052729
202944
Gammaproteobacteria
TGG
Pro
>WENV170315326
CESO01106834
339596
Gammaproteobacteria
CCT
Arg
>WENV170314580
CESO01010493
199268
Gammaproteobacteria
ACG
Arg
>WENV170315239
CESO01088785
199268
Gammaproteobacteria
ACG
Arg
>WENV170315550
CESO01133907
147914
Gammaproteobacteria
GAC
Val
>WENV170315223
CESO01086750
147777
Gammaproteobacteria
TCT
Arg
>WENV170314845
CESO01034976
238510
Gammaproteobacteria
GCC
Gly
>WENV170315431
CESO01124327
238510
Gammaproteobacteria
GCC
Gly
>WENV170314846
CESO01034976
413604
Gammaproteobacteria
GCA
Cys
>WENV170314559
CESO01008007
410215
Gammaproteobacteria
TTG
Gln
>WENV170314939
CESO01046267
410215
Gammaproteobacteria
TTG
Gln
>WENV170314493
CESO01000278
147123
Gammaproteobacteria
CAT
Met
>WENV170315771
CESO01266966
249892
Gammaproteobacteria
GTT
Asn
>WENV170315493
CESO01131090
59658
Gammaproteobacteria
CAA
Leu
>WENV170315872
CESO01310246
193253
Gammaproteobacteria
CAT
Met
>WENV170315273
CESO01094504
157977
Gammaproteobacteria
TGG
Pro
>WENV170314496
CESO01000467
173617
Gammaproteobacteria
GTC
Asp
>WENV170315545
CESO01133687
173617
Gammaproteobacteria
GTC
Asp
>WENV170315547
CESO01133720
96065
Gammaproteobacteria
TAG
Leu
>WENV170314831
CESO01033887
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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