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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170376054
CETU01036257
237493
Alphaproteobacteria
CCA
Trp
>WENV170375606
CETU01006063
10665
Alphaproteobacteria
GCT
Ser
>WENV170377319
CETU01151268
257573
Alphaproteobacteria
GAA
Phe
>WENV170375574
CETU01003639
176908
Alphaproteobacteria
GTC
Asp
>WENV170376180
CETU01043782
176908
Alphaproteobacteria
GTC
Asp
>WENV170377003
CETU01120879
339724
Alphaproteobacteria
TTG
Gln
>WENV170377007
CETU01121461
147577
Alphaproteobacteria
CCG
Arg
>WENV170378022
CETU01323941
159426
Alphaproteobacteria
CAT
Met
>WENV170375902
CETU01024434
339722
Alphaproteobacteria
TTG
Gln
>WENV170377572
CETU01167399
237740
Alphaproteobacteria
TTT
Lys
>WENV170377745
CETU01204423
243803
Alphaproteobacteria
CAT
Met
>WENV170377970
CETU01309286
339725
Alphaproteobacteria
GAA
Phe
>WENV170377009
CETU01121840
258175
Alphaproteobacteria
CGC
Ala
>WENV170376314
CETU01055156
23672
Alphaproteobacteria
GCT
Ser
>WENV170377160
CETU01135887
167926
Alphaproteobacteria
CAT
Met
>WENV170377512
CETU01163274
161002
Alphaproteobacteria
GTG
His
>WENV170376604
CETU01081991
364533
Alphaproteobacteria
GCC
Gly
>WENV170376908
CETU01111275
242540
Alphaproteobacteria
TGC
Ala
>WENV170377205
CETU01141624
359842
Alphaproteobacteria
GAC
Val
>WENV170377902
CETU01282008
65244
Alphaproteobacteria
CAG
Leu
>WENV170376738
CETU01092033
163860
Alphaproteobacteria
GGG
Pro
>WENV170375619
CETU01006698
412281
Alphaproteobacteria
CTG
Gln
>WENV170375818
CETU01019848
266073
Alphaproteobacteria
TTT
Lys
>WENV170377077
CETU01127946
266073
Alphaproteobacteria
TTT
Lys
>WENV170375884
CETU01022819
152248
Alphaproteobacteria
TGG
Pro
>WENV170376636
CETU01084285
174413
Alphaproteobacteria
CAT
Met
>WENV170377093
CETU01129548
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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