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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170420875
CEUN01030081
149985
Alphaproteobacteria
ACG
Arg
>WENV170420925
CEUN01034172
147089
Alphaproteobacteria
ACG
Arg
>WENV170422889
CEUN01209291
58865
Alphaproteobacteria
GAG
Leu
>WENV170422373
CEUN01155279
113700
Alphaproteobacteria
>WENV170421579
CEUN01085589
95928
Alphaproteobacteria
TAG
Leu
>WENV170422568
CEUN01169385
192195
Alphaproteobacteria
GTC
Asp
>WENV170421544
CEUN01083183
167926
Alphaproteobacteria
CAT
Met
>WENV170421247
CEUN01059495
359842
Alphaproteobacteria
GAC
Val
>WENV170420530
CEUN01007457
258529
Alphaproteobacteria
TGC
Ala
>WENV170422213
CEUN01142883
412281
Alphaproteobacteria
CTG
Gln
>WENV170421128
CEUN01050383
266073
Alphaproteobacteria
TTT
Lys
>WENV170422851
CEUN01184364
427621
Alphaproteobacteria
TCC
Gly
>WENV170420747
CEUN01020724
412424
Alphaproteobacteria
TCC
Gly
>WENV170421246
CEUN01058971
150356
Alphaproteobacteria
GTC
Asp
>WENV170423168
CEUN01330600
174413
Alphaproteobacteria
CAT
Met
>WENV170422102
CEUN01133613
191695
Alphaproteobacteria
CCT
Arg
>WENV170422448
CEUN01161200
62052
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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