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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170479088
CEVK01168243
340312
Alphaproteobacteria
TTG
Gln
>WENV170478856
CEVK01101686
365250
Alphaproteobacteria
GCC
Gly
>WENV170479124
CEVK01179872
313418
Alphaproteobacteria
GGC
Ala
>WENV170479253
CEVK01212302
59361
Alphaproteobacteria
GAG
Leu
>WENV170478892
CEVK01105132
10665
Alphaproteobacteria
GCT
Ser
>WENV170478210
CEVK01024476
159305
Alphaproteobacteria
GTC
Asp
>WENV170478274
CEVK01030887
339724
Alphaproteobacteria
TTG
Gln
>WENV170478429
CEVK01048628
421153
Alphaproteobacteria
>WENV170478750
CEVK01088204
338282
Alphaproteobacteria
GTT
Asn
>WENV170478517
CEVK01059203
339723
Alphaproteobacteria
>WENV170478114
CEVK01013328
162801
Alphaproteobacteria
GTG
His
>WENV170478124
CEVK01014280
162801
Alphaproteobacteria
GTG
His
>WENV170478931
CEVK01107617
162801
Alphaproteobacteria
GTG
His
>WENV170478338
CEVK01036454
77433
Alphaproteobacteria
CAG
Leu
>WENV170478722
CEVK01085297
338289
Alphaproteobacteria
GAC
Val
>WENV170479130
CEVK01181236
338289
Alphaproteobacteria
GAC
Val
>WENV170478404
CEVK01044871
417107
Alphaproteobacteria
GCA
Cys
>WENV170478669
CEVK01079297
339725
Alphaproteobacteria
GAA
Phe
>WENV170478877
CEVK01104174
258175
Alphaproteobacteria
CGC
Ala
>WENV170478118
CEVK01013787
237196
Alphaproteobacteria
CGT
Thr
>WENV170478665
CEVK01078855
96322
Alphaproteobacteria
CAA
Leu
>WENV170478536
CEVK01062088
160158
Alphaproteobacteria
GAT
Ile
>WENV170478899
CEVK01105461
412281
Alphaproteobacteria
CTG
Gln
>WENV170478183
CEVK01021191
266073
Alphaproteobacteria
TTT
Lys
>WENV170478547
CEVK01063619
369678
Alphaproteobacteria
GGT
Thr
>WENV170478667
CEVK01079066
369678
Alphaproteobacteria
GGT
Thr
>WENV170478128
CEVK01014719
377327
Alphaproteobacteria
GCC
Gly
>WENV170478906
CEVK01105886
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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