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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170482003
CEVM01000823
417107
Alphaproteobacteria
GCA
Cys
>WENV170482053
CEVM01003348
161002
Alphaproteobacteria
GTG
His
>WENV170482075
CEVM01004327
21074
Alphaproteobacteria
GGA
Ser
>WENV170482099
CEVM01006287
313418
Alphaproteobacteria
GGC
Ala
>WENV170482252
CEVM01016259
369678
Alphaproteobacteria
GGT
Thr
>WENV170482259
CEVM01016658
114040
Alphaproteobacteria
CAA
Leu
>WENV170482285
CEVM01018921
421153
Alphaproteobacteria
>WENV170482311
CEVM01021166
338289
Alphaproteobacteria
GAC
Val
>WENV170482343
CEVM01023530
200119
Alphaproteobacteria
CAT
Met
>WENV170482432
CEVM01029594
74116
Alphaproteobacteria
CAG
Leu
>WENV170482481
CEVM01034223
147577
Alphaproteobacteria
CCG
Arg
>WENV170482538
CEVM01038917
338282
Alphaproteobacteria
GTT
Asn
>WENV170482544
CEVM01039182
29831
Alphaproteobacteria
TGA
Ser
>WENV170482624
CEVM01045449
23468
Alphaproteobacteria
GCT
Ser
>WENV170482667
CEVM01049870
338287
Alphaproteobacteria
GGT
Thr
>WENV170482674
CEVM01050655
59164
Alphaproteobacteria
GAG
Leu
>WENV170482678
CEVM01050922
23743
Alphaproteobacteria
GCT
Ser
>WENV170482707
CEVM01053640
150356
Alphaproteobacteria
GTC
Asp
>WENV170482765
CEVM01057584
145208
Alphaproteobacteria
CAT
Met
>WENV170482824
CEVM01062061
365250
Alphaproteobacteria
GCC
Gly
>WENV170482914
CEVM01070174
244489
Alphaproteobacteria
CTT
Lys
>WENV170482935
CEVM01072214
130084
Alphaproteobacteria
GGG
Pro
>WENV170482975
CEVM01075931
23384
Alphaproteobacteria
GGA
Ser
>WENV170483032
CEVM01081043
338282
Alphaproteobacteria
GTT
Asn
>WENV170483059
CEVM01083815
252148
Alphaproteobacteria
TGT
Thr
>WENV170483062
CEVM01084179
377327
Alphaproteobacteria
GCC
Gly
>WENV170483111
CEVM01090598
351007
Alphaproteobacteria
TTC
Glu
>WENV170483150
CEVM01094572
113700
Alphaproteobacteria
>WENV170483182
CEVM01098071
145689
Alphaproteobacteria
CCT
Arg
>WENV170483188
CEVM01098897
193837
Alphaproteobacteria
CAT
Met
>WENV170483189
CEVM01098964
235427
Alphaproteobacteria
CCA
Trp
>WENV170483190
CEVM01099058
339725
Alphaproteobacteria
GAA
Phe
>WENV170483193
CEVM01099147
59361
Alphaproteobacteria
GAG
Leu
>WENV170483354
CEVM01113402
338760
Alphaproteobacteria
GAA
Phe
>WENV170483503
CEVM01123771
167926
Alphaproteobacteria
CAT
Met
>WENV170483523
CEVM01124404
21074
Alphaproteobacteria
GGA
Ser
>WENV170483540
CEVM01125510
23717
Alphaproteobacteria
TGA
Ser
>WENV170483666
CEVM01129640
147334
Alphaproteobacteria
CAT
Met
>WENV170483716
CEVM01153854
307050
Alphaproteobacteria
GGC
Ala
>WENV170483761
CEVM01173546
235496
Alphaproteobacteria
TAC
Val
>WENV170483917
CEVM01219328
282595
Alphaproteobacteria
CCA
Trp
>WENV170483948
CEVM01225957
339724
Alphaproteobacteria
TTG
Gln
>WENV170484057
CEVM01252017
159305
Alphaproteobacteria
GTC
Asp
>WENV170484080
CEVM01256963
266073
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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