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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170559472
CXWL01124816
152317
Gammaproteobacteria
CAT
Met
>WENV170557538
CXWL01029730
183605
Gammaproteobacteria
CCG
Arg
>WENV170557904
CXWL01042151
183605
Gammaproteobacteria
CCG
Arg
>WENV170559196
CXWL01113907
235837
Gammaproteobacteria
GTT
Asn
>WENV170559665
CXWL01135613
235837
Gammaproteobacteria
GTT
Asn
>WENV170557134
CXWL01019826
155696
Gammaproteobacteria
TCT
Arg
>WENV170559445
CXWL01123850
26165
Gammaproteobacteria
GGA
Ser
>WENV170559815
CXWL01154316
26165
Gammaproteobacteria
GGA
Ser
>WENV170559952
CXWL01183449
26165
Gammaproteobacteria
GGA
Ser
>WENV170555621
CXWL01001487
255852
Gammaproteobacteria
TTC
Glu
>WENV170555622
CXWL01001487
255852
Gammaproteobacteria
TTC
Glu
>WENV170559717
CXWL01141634
146623
Gammaproteobacteria
CCT
Arg
>WENV170558228
CXWL01058151
412176
Gammaproteobacteria
CCC
Gly
>WENV170557314
CXWL01024005
236013
Gammaproteobacteria
TGC
Ala
>WENV170559364
CXWL01120504
16301
Gammaproteobacteria
TGA
Ser
>WENV170558385
CXWL01066846
46594
Gammaproteobacteria
GGA
Ser
>WENV170557766
CXWL01036778
197713
Gammaproteobacteria
CAT
Met
>WENV170559851
CXWL01161389
2882
Gammaproteobacteria
>WENV170558608
CXWL01080800
411594
Gammaproteobacteria
TCC
Gly
>WENV170559729
CXWL01143305
340812
Gammaproteobacteria
TTG
Gln
>WENV170559754
CXWL01146741
340812
Gammaproteobacteria
TTG
Gln
>WENV170557160
CXWL01020351
322642
Gammaproteobacteria
GGT
Thr
>WENV170559902
CXWL01171222
426758
Gammaproteobacteria
GCA
Cys
>WENV170559486
CXWL01125487
279806
Gammaproteobacteria
TGT
Thr
>WENV170559501
CXWL01126137
145335
Gammaproteobacteria
GGG
Pro
>WENV170559677
CXWL01136664
145335
Gammaproteobacteria
GGG
Pro
>WENV170559945
CXWL01181385
147027
Gammaproteobacteria
CAT
Met
>WENV170558664
CXWL01083648
95750
Gammaproteobacteria
TAG
Leu
>WENV170555693
CXWL01001787
44872
Gammaproteobacteria
GGA
Ser
>WENV170557193
CXWL01020940
237412
Gammaproteobacteria
TAC
Val
>WENV170559419
CXWL01122855
319098
Gammaproteobacteria
TAC
Val
>WENV170559225
CXWL01114946
411725
Gammaproteobacteria
CCC
Gly
>WENV170557129
CXWL01019753
237418
Gammaproteobacteria
GTT
Asn
>WENV170559649
CXWL01134716
338627
Gammaproteobacteria
>WENV170559915
CXWL01174819
45459
Gammaproteobacteria
GGA
Ser
>WENV170559324
CXWL01119237
58859
Gammaproteobacteria
CAG
Leu
>WENV170559801
CXWL01151842
144736
Gammaproteobacteria
ACG
Arg
>WENV170559809
CXWL01153526
75411
Gammaproteobacteria
GAG
Leu
>WENV170559113
CXWL01110713
44927
Gammaproteobacteria
TGA
Ser
>WENV170558733
CXWL01087106
241212
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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