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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV005371
EU063624
146761
Bacteroidota
GAT
Ile
>ENV005330
EU059854
46165
Bacteroidota
TGA
Ser
>ENV000731
AJ937771
309582
Bacteroidota
TTT
Lys
>ENV001482
AY933592
180185
Bacteroidota
TGC
Ala
>ENV003810
DQ009476
180185
Bacteroidota
TGC
Ala
>ENV000118
AC149043
151513
Bacteroidota
TGC
Ala
>ENV004045
DQ227614
151513
Bacteroidota
TGC
Ala
>ENV005324
EU058573
20893
Bacteroidota
GGA
Ser
>ENV001549
AY933626
145683
Bacteroidota
TGC
Ala
>ENV001500
AY933601
151405
Bacteroidota
TGC
Ala
>ENV003157
DQ009092
151405
Bacteroidota
TGC
Ala
>ENV003160
DQ009094
151405
Bacteroidota
TGC
Ala
>ENV003162
DQ009095
151405
Bacteroidota
TGC
Ala
>ENV003650
DQ009385
151405
Bacteroidota
TGC
Ala
>ENV005398
EU066668
148575
Bacteroidota
CAT
Met
>ENV000116
AC149043
96678
Bacteroidota
TAG
Leu
>ENV005383
EU065184
171336
Bacteroidota
GGC
Ala
>ENV001469
AY933586
159518
Bacteroidota
GAT
Ile
>ENV001493
AY933598
159518
Bacteroidota
GAT
Ile
>ENV001514
AY933609
159518
Bacteroidota
GAT
Ile
>ENV001518
AY933611
159518
Bacteroidota
GAT
Ile
>ENV001520
AY933612
159518
Bacteroidota
GAT
Ile
>ENV001524
AY933614
159518
Bacteroidota
GAT
Ile
>ENV001536
AY933620
159518
Bacteroidota
GAT
Ile
>ENV001562
AY933633
159518
Bacteroidota
GAT
Ile
>ENV001564
AY933634
159518
Bacteroidota
GAT
Ile
>ENV002960
AY934393
159518
Bacteroidota
GAT
Ile
>ENV003203
DQ009116
159518
Bacteroidota
GAT
Ile
>ENV005362
EU062567
52358
Bacteroidota
TGA
Ser
>ENV005380
EU064307
52358
Bacteroidota
TGA
Ser
>ENV005416
EU067686
52358
Bacteroidota
TGA
Ser
>ENV005366
EU063101
154643
Bacteroidota
CAT
Met
>ENV005410
EU067481
44852
Bacteroidota
TAA
Leu
>ENV005390
EU065731
50727
Bacteroidota
TGA
Ser
>ENV005393
EU066106
132360
Bacteroidota
GGG
Pro
>ENV005361
EU062316
425638
Bacteroidota
CTG
Gln
>ENV000369
AF422493
153768
Bacteroidota
TGC
Ala
>ENV005367
EU063295
353927
Bacteroidota
TTC
Glu
>ENV005381
EU064912
353927
Bacteroidota
TTC
Glu
>ENV005382
EU064912
353927
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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