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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170572266
FLOH01000675
236929
Bacteroidota
TTT
Lys
>WENV170570363
FLOH01000001
165001
Bacteroidota
GTT
Asn
>WENV170570453
FLOH01000005
165001
Bacteroidota
GTT
Asn
>WENV170570911
FLOH01000037
165001
Bacteroidota
GTT
Asn
>WENV170571070
FLOH01000063
126966
Bacteroidota
TAC
Val
>WENV170570876
FLOH01000032
361294
Bacteroidota
GGT
Thr
>WENV170571618
FLOH01000232
126691
Bacteroidota
TGG
Pro
>WENV170572657
FLOH01001126
126691
Bacteroidota
TGG
Pro
>WENV170572255
FLOH01000662
127464
Bacteroidota
TAC
Val
>WENV170572366
FLOH01000786
237247
Bacteroidota
TTT
Lys
>WENV170571724
FLOH01000279
102360
Bacteroidota
TAG
Leu
>WENV170570464
FLOH01000005
338625
Bacteroidota
TTC
Glu
>WENV170572184
FLOH01000584
338625
Bacteroidota
TTC
Glu
>WENV170570364
FLOH01000001
169357
Bacteroidota
CAT
Met
>WENV170571754
FLOH01000291
169357
Bacteroidota
CAT
Met
>WENV170572656
FLOH01001126
60611
Bacteroidota
GCT
Ser
>WENV170572317
FLOH01000739
241347
Bacteroidota
TTG
Gln
>WENV170571984
FLOH01000431
241469
Bacteroidota
GAA
Phe
>WENV170571669
FLOH01000254
45519
Bacteroidota
GGA
Ser
>WENV170572760
FLOH01001272
181746
Bacteroidota
GGC
Ala
>WENV170570465
FLOH01000005
60695
Bacteroidota
GCT
Ser
>WENV170570450
FLOH01000005
150103
Bacteroidota
GTG
His
>WENV170572126
FLOH01000545
150103
Bacteroidota
GTG
His
>WENV170570463
FLOH01000005
127414
Bacteroidota
TGG
Pro
>WENV170570466
FLOH01000005
127414
Bacteroidota
TGG
Pro
>WENV170570451
FLOH01000005
44938
Bacteroidota
TGA
Ser
>WENV170570378
FLOH01000002
159518
Bacteroidota
GAT
Ile
>WENV170570387
FLOH01000002
159518
Bacteroidota
GAT
Ile
>WENV170570390
FLOH01000002
127153
Bacteroidota
TAC
Val
>WENV170570915
FLOH01000037
95727
Bacteroidota
TAG
Leu
>WENV170570467
FLOH01000005
152147
Bacteroidota
TCT
Arg
>WENV170572088
FLOH01000526
80676
Bacteroidota
GTA
Tyr
>WENV170572046
FLOH01000495
354570
Bacteroidota
TTC
Glu
>WENV170570456
FLOH01000005
150454
Bacteroidota
TGT
Thr
>WENV170570873
FLOH01000032
150454
Bacteroidota
TGT
Thr
>WENV170571619
FLOH01000232
150454
Bacteroidota
TGT
Thr
>WENV170571421
FLOH01000158
246641
Bacteroidota
GAA
Phe
>WENV170572658
FLOH01001126
145408
Bacteroidota
TCT
Arg
>WENV170572691
FLOH01001165
145555
Bacteroidota
GTC
Asp
>WENV170573038
FLOH01004400
145555
Bacteroidota
GTC
Asp
>WENV170570913
FLOH01000037
412187
Bacteroidota
>WENV170572142
FLOH01000558
341465
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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