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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180029818
FTJL01006764
96188
Alphaproteobacteria
CAG
Leu
>WENV180029827
FTJL01007619
244489
Alphaproteobacteria
CTT
Lys
>WENV180029828
FTJL01007619
244489
Alphaproteobacteria
CTT
Lys
>WENV180029777
FTJL01004654
364533
Alphaproteobacteria
GCC
Gly
>WENV180029831
FTJL01007734
364533
Alphaproteobacteria
GCC
Gly
>WENV180030182
FTJL01280637
159427
Alphaproteobacteria
GTG
His
>WENV180029912
FTJL01019114
341164
Alphaproteobacteria
GCC
Gly
>WENV180029794
FTJL01005399
424918
Alphaproteobacteria
TCC
Gly
>WENV180030091
FTJL01146882
424918
Alphaproteobacteria
TCC
Gly
>WENV180029814
FTJL01006475
184904
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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