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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180035042
FTKT01000355
45127
Betaproteobacteria
CGA
Ser
>WENV180035078
FTKT01000907
59502
Betaproteobacteria
TAA
Leu
>WENV180035095
FTKT01001515
152292
Betaproteobacteria
TTG
Gln
>WENV180035104
FTKT01001875
154591
Betaproteobacteria
CAT
Met
>WENV180035128
FTKT01002483
154591
Betaproteobacteria
CAT
Met
>WENV180035133
FTKT01002584
153173
Betaproteobacteria
CAT
Met
>WENV180035135
FTKT01002664
152292
Betaproteobacteria
TTG
Gln
>WENV180035142
FTKT01002765
400411
Betaproteobacteria
GGT
Thr
>WENV180035150
FTKT01002925
154591
Betaproteobacteria
CAT
Met
>WENV180035164
FTKT01003202
153173
Betaproteobacteria
CAT
Met
>WENV180035197
FTKT01005101
176286
Betaproteobacteria
CAT
Met
>WENV180035198
FTKT01005402
45127
Betaproteobacteria
CGA
Ser
>WENV180035236
FTKT01020028
145694
Betaproteobacteria
ACG
Arg
>WENV180035248
FTKT01034374
154591
Betaproteobacteria
CAT
Met
>WENV180035251
FTKT01035302
154591
Betaproteobacteria
CAT
Met
>WENV180035291
FTKT01096015
59085
Betaproteobacteria
TAG
Leu
>WENV180035299
FTKT01116519
59085
Betaproteobacteria
TAG
Leu
>WENV180035300
FTKT01117276
246006
Betaproteobacteria
TTT
Lys
>WENV180035356
FTKT01344271
59085
Betaproteobacteria
TAG
Leu
>WENV180035385
FTKT01457640
246006
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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