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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170680780
LFEF01022129
147373
Gammaproteobacteria
CAT
Met
>WENV170680661
LFEF01008280
7214
Gammaproteobacteria
GCT
Ser
>WENV170680768
LFEF01019921
238941
Gammaproteobacteria
>WENV170680609
LFEF01003001
235516
Gammaproteobacteria
GTG
His
>WENV170680690
LFEF01010639
412176
Gammaproteobacteria
CCC
Gly
>WENV170681033
LFEF01045243
58815
Gammaproteobacteria
CAA
Leu
>WENV170680916
LFEF01034003
23429
Gammaproteobacteria
GGA
Ser
>WENV170681039
LFEF01045538
347438
Gammaproteobacteria
CTG
Gln
>WENV170681041
LFEF01045967
248781
Gammaproteobacteria
TTG
Gln
>WENV170680746
LFEF01017246
146908
Gammaproteobacteria
GGG
Pro
>WENV170680593
LFEF01001226
247088
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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