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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705453
LNAO01000536
235837
Gammaproteobacteria
GTT
Asn
>WENV170705534
LNAO01001851
235837
Gammaproteobacteria
GTT
Asn
>WENV170705562
LNAO01002659
235837
Gammaproteobacteria
GTT
Asn
>WENV170705582
LNAO01003104
235837
Gammaproteobacteria
GTT
Asn
>WENV170705546
LNAO01002142
95633
Gammaproteobacteria
GTA
Tyr
>WENV170705510
LNAO01001365
58812
Gammaproteobacteria
TAA
Leu
>WENV170705412
LNAO01000205
168586
Gammaproteobacteria
GAT
Ile
>WENV170705459
LNAO01000588
16301
Gammaproteobacteria
TGA
Ser
>WENV170705561
LNAO01002657
16301
Gammaproteobacteria
TGA
Ser
>WENV170705571
LNAO01002925
16301
Gammaproteobacteria
TGA
Ser
>WENV170705517
LNAO01001516
6885
Gammaproteobacteria
GCT
Ser
>WENV170705395
LNAO01000050
2882
Gammaproteobacteria
>WENV170705586
LNAO01003117
190084
Gammaproteobacteria
CCT
Arg
>WENV170705581
LNAO01003101
279806
Gammaproteobacteria
TGT
Thr
>WENV170705492
LNAO01001058
145335
Gammaproteobacteria
GGG
Pro
>WENV170705567
LNAO01002686
145335
Gammaproteobacteria
GGG
Pro
>WENV170705518
LNAO01001548
298259
Gammaproteobacteria
GAA
Phe
>WENV170705594
LNAO01003479
264771
Gammaproteobacteria
GTG
His
>WENV170705596
LNAO01003479
264771
Gammaproteobacteria
GTG
His
>WENV170705548
LNAO01002142
235512
Gammaproteobacteria
GGT
Thr
>WENV170705558
LNAO01002496
235512
Gammaproteobacteria
GGT
Thr
>WENV170705595
LNAO01003479
95729
Gammaproteobacteria
TAG
Leu
>WENV170705520
LNAO01001586
269152
Gammaproteobacteria
GTG
His
>WENV170705479
LNAO01000882
319098
Gammaproteobacteria
TAC
Val
>WENV170705420
LNAO01000269
311863
Gammaproteobacteria
GGC
Ala
>WENV170705437
LNAO01000379
44927
Gammaproteobacteria
TGA
Ser
>WENV170705550
LNAO01002175
44927
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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