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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180043185
LQAH01008349
113700
Alphaproteobacteria
>WENV180043203
LQAH01010136
176908
Alphaproteobacteria
GTC
Asp
>WENV180043087
LQAH01001742
339723
Alphaproteobacteria
>WENV180043274
LQAH01019669
147083
Alphaproteobacteria
GGG
Pro
>WENV180043091
LQAH01001857
147334
Alphaproteobacteria
CAT
Met
>WENV180043250
LQAH01015870
147334
Alphaproteobacteria
CAT
Met
>WENV180043349
LQAH01034132
147876
Alphaproteobacteria
TCT
Arg
>WENV180043216
LQAH01011042
284043
Alphaproteobacteria
CGT
Thr
>WENV180043102
LQAH01002158
338760
Alphaproteobacteria
GAA
Phe
>WENV180043179
LQAH01007078
338760
Alphaproteobacteria
GAA
Phe
>WENV180043080
LQAH01001495
152248
Alphaproteobacteria
TGG
Pro
>WENV180043070
LQAH01001055
339606
Alphaproteobacteria
>WENV180043247
LQAH01014882
412424
Alphaproteobacteria
TCC
Gly
>WENV180043336
LQAH01031889
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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