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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170742400
LULU01017196
412259
Alphaproteobacteria
CTG
Gln
>WENV170742343
LULU01012491
365250
Alphaproteobacteria
GCC
Gly
>WENV170742192
LULU01003540
147152
Alphaproteobacteria
ACG
Arg
>WENV170742176
LULU01003119
113700
Alphaproteobacteria
>WENV170742268
LULU01007705
395846
Alphaproteobacteria
GAC
Val
>WENV170742107
LULU01001112
237197
Alphaproteobacteria
CCA
Trp
>WENV170742351
LULU01013090
95928
Alphaproteobacteria
TAG
Leu
>WENV170742603
LULU01044432
147334
Alphaproteobacteria
CAT
Met
>WENV170742142
LULU01002114
412260
Alphaproteobacteria
TCC
Gly
>WENV170742281
LULU01008598
23650
Alphaproteobacteria
TGA
Ser
>WENV170742531
LULU01032967
192195
Alphaproteobacteria
GTC
Asp
>WENV170742350
LULU01012968
23648
Alphaproteobacteria
CGA
Ser
>WENV170742630
LULU01048910
284043
Alphaproteobacteria
CGT
Thr
>WENV170742572
LULU01040527
348781
Alphaproteobacteria
GAA
Phe
>WENV170742358
LULU01013573
339639
Alphaproteobacteria
TTG
Gln
>WENV170742363
LULU01013825
339609
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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