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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170752956
LUMJ01008698
313881
Gammaproteobacteria
GGC
Ala
>WENV170752381
LUMJ01000505
149035
Gammaproteobacteria
CCG
Arg
>WENV170753239
LUMJ01028238
149035
Gammaproteobacteria
CCG
Arg
>WENV170752573
LUMJ01001565
283668
Gammaproteobacteria
TTT
Lys
>WENV170752227
LUMJ01000086
147053
Gammaproteobacteria
GTT
Asn
>WENV170752395
LUMJ01000598
145260
Gammaproteobacteria
CAT
Met
>WENV170752197
LUMJ01000023
160030
Gammaproteobacteria
GGG
Pro
>WENV170752569
LUMJ01001537
236366
Gammaproteobacteria
GTG
His
>WENV170752371
LUMJ01000470
185163
Gammaproteobacteria
ACG
Arg
>WENV170752235
LUMJ01000099
149036
Gammaproteobacteria
CCA
Trp
>WENV170752297
LUMJ01000199
149036
Gammaproteobacteria
CCA
Trp
>WENV170752200
LUMJ01000030
145261
Gammaproteobacteria
CAT
Met
>WENV170752607
LUMJ01001804
412799
Gammaproteobacteria
GCA
Cys
>WENV170752212
LUMJ01000049
340801
Gammaproteobacteria
CCT
Arg
>WENV170752519
LUMJ01001168
95750
Gammaproteobacteria
TAG
Leu
>WENV170752254
LUMJ01000121
97031
Gammaproteobacteria
TAG
Leu
>WENV170752255
LUMJ01000121
149038
Gammaproteobacteria
TGG
Pro
>WENV170752351
LUMJ01000401
149038
Gammaproteobacteria
TGG
Pro
>WENV170752713
LUMJ01002966
247974
Gammaproteobacteria
CCA
Trp
>WENV170752262
LUMJ01000146
59830
Gammaproteobacteria
CAA
Leu
>WENV170752496
LUMJ01001056
240084
Gammaproteobacteria
GGT
Thr
>WENV170752608
LUMJ01001804
77137
Gammaproteobacteria
TAA
Leu
>WENV170752241
LUMJ01000102
411842
Gammaproteobacteria
GCA
Cys
>WENV170752977
LUMJ01009228
193275
Gammaproteobacteria
GAT
Ile
>WENV170752187
LUMJ01000012
149037
Gammaproteobacteria
GAC
Val
>WENV170753050
LUMJ01012940
149037
Gammaproteobacteria
GAC
Val
>WENV170753220
LUMJ01026094
149037
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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