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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170765354
LWDU01037229
237493
Alphaproteobacteria
CCA
Trp
>WENV170765389
LWDU01037347
237493
Alphaproteobacteria
CCA
Trp
>WENV170765394
LWDU01037351
339737
Alphaproteobacteria
GAC
Val
>WENV170765337
LWDU01037151
58865
Alphaproteobacteria
GAG
Leu
>WENV170765345
LWDU01037183
58865
Alphaproteobacteria
GAG
Leu
>WENV170765381
LWDU01037345
58865
Alphaproteobacteria
GAG
Leu
>WENV170766340
LWDU01041374
267922
Alphaproteobacteria
CCA
Trp
>WENV170765339
LWDU01037161
10665
Alphaproteobacteria
GCT
Ser
>WENV170765403
LWDU01037354
10665
Alphaproteobacteria
GCT
Ser
>WENV170765416
LWDU01037434
241021
Alphaproteobacteria
GGC
Ala
>WENV170765369
LWDU01037343
339724
Alphaproteobacteria
TTG
Gln
>WENV170765351
LWDU01037194
421153
Alphaproteobacteria
>WENV170765405
LWDU01037357
421153
Alphaproteobacteria
>WENV170763531
LWDU01011739
339723
Alphaproteobacteria
>WENV170763880
LWDU01023612
147083
Alphaproteobacteria
GGG
Pro
>WENV170765350
LWDU01037193
16408
Alphaproteobacteria
GGA
Ser
>WENV170765384
LWDU01037345
16408
Alphaproteobacteria
GGA
Ser
>WENV170765379
LWDU01037344
95928
Alphaproteobacteria
TAG
Leu
>WENV170765347
LWDU01037186
162801
Alphaproteobacteria
GTG
His
>WENV170765376
LWDU01037343
162801
Alphaproteobacteria
GTG
His
>WENV170765375
LWDU01037343
82652
Alphaproteobacteria
GTA
Tyr
>WENV170765357
LWDU01037247
357160
Alphaproteobacteria
TTC
Glu
>WENV170765402
LWDU01037353
357160
Alphaproteobacteria
TTC
Glu
>WENV170763170
LWDU01003392
281594
Alphaproteobacteria
TGT
Thr
>WENV170765411
LWDU01037403
147287
Alphaproteobacteria
TGG
Pro
>WENV170765372
LWDU01037343
339725
Alphaproteobacteria
GAA
Phe
>WENV170765342
LWDU01037171
258175
Alphaproteobacteria
CGC
Ala
>WENV170765374
LWDU01037343
258175
Alphaproteobacteria
CGC
Ala
>WENV170763829
LWDU01021758
23672
Alphaproteobacteria
GCT
Ser
>WENV170765377
LWDU01037343
167926
Alphaproteobacteria
CAT
Met
>WENV170765338
LWDU01037159
364533
Alphaproteobacteria
GCC
Gly
>WENV170765382
LWDU01037345
364533
Alphaproteobacteria
GCC
Gly
>WENV170765408
LWDU01037369
65244
Alphaproteobacteria
CAG
Leu
>WENV170763257
LWDU01005315
147283
Alphaproteobacteria
GTG
His
>WENV170765990
LWDU01040205
279830
Alphaproteobacteria
TAC
Val
>WENV170765352
LWDU01037206
412281
Alphaproteobacteria
CTG
Gln
>WENV170765383
LWDU01037345
412281
Alphaproteobacteria
CTG
Gln
>WENV170765404
LWDU01037357
369678
Alphaproteobacteria
GGT
Thr
>WENV170765998
LWDU01040235
369678
Alphaproteobacteria
GGT
Thr
>WENV170765361
LWDU01037301
369678
Alphaproteobacteria
GGT
Thr
>WENV170765397
LWDU01037353
147289
Alphaproteobacteria
GTC
Asp
>WENV170763955
LWDU01025651
174413
Alphaproteobacteria
CAT
Met
>WENV170765370
LWDU01037343
174413
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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