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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170776582
LXOW01184099
37213
Bacillota
TGA
Ser
>WENV170777785
LXOW01323052
156189
Bacillota
GAT
Ile
>WENV170777661
LXOW01308893
425593
Bacillota
CCC
Gly
>WENV170776381
LXOW01162054
347827
Bacillota
TTC
Glu
>WENV170775796
LXOW01089199
307003
Bacillota
TGC
Ala
>WENV170778064
LXOW01355536
193585
Bacillota
CGG
Pro
>WENV170778145
LXOW01363690
243119
Bacillota
CTT
Lys
>WENV170777178
LXOW01254524
16820
Bacillota
GCT
Ser
>WENV170775195
LXOW01021905
235137
Bacillota
TGC
Ala
>WENV170776073
LXOW01123882
152512
Bacillota
CCT
Arg
>WENV170778460
LXOW01406395
235091
Bacillota
CTT
Lys
>WENV170778065
LXOW01355536
10943
Bacillota
GGA
Ser
>WENV170776628
LXOW01189291
342736
Bacillota
TTG
Gln
>WENV170775713
LXOW01079564
152513
Bacillota
GAC
Val
>WENV170775784
LXOW01087951
271471
Bacillota
GCC
Gly
>WENV170778481
LXOW01408448
158241
Bacillota
GTC
Asp
>WENV170775781
LXOW01087951
263765
Bacillota
TAC
Val
>WENV170776282
LXOW01149364
248683
Bacillota
TTT
Lys
>WENV170776281
LXOW01149364
344183
Bacillota
CTG
Gln
>WENV170776284
LXOW01149364
304759
Bacillota
TAC
Val
>WENV170777080
LXOW01242786
152045
Bacillota
CAT
Met
>WENV170776283
LXOW01149364
243398
Bacillota
TTC
Glu
>WENV170776815
LXOW01212030
245386
Bacillota
CCA
Trp
>WENV170777810
LXOW01325683
152051
Bacillota
ACG
Arg
>WENV170775057
LXOW01004460
243401
Bacillota
CGT
Thr
>WENV170775249
LXOW01025312
243401
Bacillota
CGT
Thr
>WENV170776497
LXOW01176474
345314
Bacillota
TTG
Gln
>WENV170775874
LXOW01099819
157838
Bacillota
GTC
Asp
>WENV170778302
LXOW01383436
320668
Bacillota
CTT
Lys
>WENV170777102
LXOW01245113
247734
Bacillota
TGC
Ala
>WENV170777549
LXOW01298082
247734
Bacillota
TGC
Ala
>WENV170778451
LXOW01403995
429578
Bacillota
GCA
Cys
>WENV170777968
LXOW01343283
295033
Bacillota
GAA
Phe
>WENV170777117
LXOW01247175
248965
Bacillota
GCC
Gly
>WENV170777480
LXOW01287130
248965
Bacillota
GCC
Gly
>WENV170778704
LXOW01427394
248965
Bacillota
GCC
Gly
>WENV170775686
LXOW01076815
178024
Bacillota
TCT
Arg
>WENV170778224
LXOW01373087
178024
Bacillota
TCT
Arg
>WENV170778119
LXOW01360242
338127
Bacillota
TTG
Gln
>WENV170776613
LXOW01188490
384950
Bacillota
GCC
Gly
>WENV170776817
LXOW01212030
148144
Bacillota
CAT
Met
>WENV170776650
LXOW01193307
413179
Bacillota
CCC
Gly
>WENV170778515
LXOW01412154
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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