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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180072420
MPMA02018965
260015
Alphaproteobacteria
CTC
Glu
>WENV180072616
MPMA02030802
185438
Alphaproteobacteria
GAT
Ile
>WENV180072773
MPMA02040430
260015
Alphaproteobacteria
CTC
Glu
>WENV180072927
MPMA02050461
252148
Alphaproteobacteria
TGT
Thr
>WENV180073058
MPMA02058351
260015
Alphaproteobacteria
CTC
Glu
>WENV180073213
MPMA02067599
192195
Alphaproteobacteria
GTC
Asp
>WENV180073375
MPMA02078032
192195
Alphaproteobacteria
GTC
Asp
>WENV180073636
MPMA02091594
192195
Alphaproteobacteria
GTC
Asp
>WENV180073834
MPMA02103872
66752
Alphaproteobacteria
CAG
Leu
>WENV180073984
MPMA02113352
193837
Alphaproteobacteria
CAT
Met
>WENV180074002
MPMA02114124
185438
Alphaproteobacteria
GAT
Ile
>WENV180074004
MPMA02114149
185438
Alphaproteobacteria
GAT
Ile
>WENV180074052
MPMA02117332
200119
Alphaproteobacteria
CAT
Met
>WENV180074835
MPMA02170745
192195
Alphaproteobacteria
GTC
Asp
>WENV180075098
MPMA02187795
200119
Alphaproteobacteria
CAT
Met
>WENV180075897
MPMA02242677
260015
Alphaproteobacteria
CTC
Glu
>WENV180076312
MPMA02272951
260015
Alphaproteobacteria
CTC
Glu
>WENV180076315
MPMA02273033
260015
Alphaproteobacteria
CTC
Glu
>WENV180076344
MPMA02275144
193837
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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