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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180119352
OASD01049966
238489
Bacillota
GTC
Asp
>WENV180119434
OASD01090173
356488
Bacillota
TGT
Thr
>WENV180118821
OASD01001181
425593
Bacillota
CCC
Gly
>WENV180118968
OASD01004284
37549
Bacillota
TAA
Leu
>WENV180118999
OASD01005273
147639
Bacillota
ACG
Arg
>WENV180119082
OASD01009046
59312
Bacillota
CAG
Leu
>WENV180119098
OASD01010649
193585
Bacillota
CGG
Pro
>WENV180118994
OASD01005273
239020
Bacillota
TTT
Lys
>WENV180118768
OASD01000820
154766
Bacillota
GTC
Asp
>WENV180119436
OASD01091541
154766
Bacillota
GTC
Asp
>WENV180118950
OASD01003951
338147
Bacillota
CTC
Glu
>WENV180118951
OASD01003965
338147
Bacillota
CTC
Glu
>WENV180119057
OASD01007568
338147
Bacillota
CTC
Glu
>WENV180119409
OASD01070161
235150
Bacillota
TGC
Ala
>WENV180118795
OASD01000947
152047
Bacillota
GGG
Pro
>WENV180119053
OASD01007282
16820
Bacillota
GCT
Ser
>WENV180118682
OASD01000354
152512
Bacillota
CCT
Arg
>WENV180118964
OASD01004284
152459
Bacillota
GTC
Asp
>WENV180119105
OASD01010657
235114
Bacillota
TTT
Lys
>WENV180118830
OASD01001283
10926
Bacillota
CGA
Ser
>WENV180118974
OASD01004526
44859
Bacillota
AAG
Leu
>WENV180119319
OASD01042961
11034
Bacillota
GGA
Ser
>WENV180119317
OASD01041858
247057
Bacillota
TGC
Ala
>WENV180119099
OASD01010649
10943
Bacillota
GGA
Ser
>WENV180119353
OASD01049966
238151
Bacillota
>WENV180118910
OASD01003058
342736
Bacillota
TTG
Gln
>WENV180119190
OASD01018936
235079
Bacillota
GAA
Phe
>WENV180118953
OASD01004012
296878
Bacillota
GTT
Asn
>WENV180118979
OASD01004717
295714
Bacillota
GCC
Gly
>WENV180118966
OASD01004284
340265
Bacillota
GCC
Gly
>WENV180118895
OASD01002758
173314
Bacillota
GAT
Ile
>WENV180119007
OASD01005273
173314
Bacillota
GAT
Ile
>WENV180119167
OASD01015592
152513
Bacillota
GAC
Val
>WENV180119351
OASD01049708
245298
Bacillota
CGG
Pro
>WENV180118941
OASD01003649
37551
Bacillota
CGA
Ser
>WENV180118867
OASD01002096
81644
Bacillota
GAG
Leu
>WENV180119426
OASD01077350
81644
Bacillota
GAG
Leu
>WENV180119432
OASD01085220
340081
Bacillota
CCG
Arg
>WENV180119188
OASD01018936
235078
Bacillota
TAC
Val
>WENV180119103
OASD01010657
144610
Bacillota
GTG
His
>WENV180118689
OASD01000374
238745
Bacillota
CTT
Lys
>WENV180118967
OASD01004284
419945
Bacillota
GCA
Cys
>WENV180119400
OASD01066420
37307
Bacillota
TGA
Ser
>WENV180119153
OASD01014039
152045
Bacillota
CAT
Met
>WENV180118954
OASD01004012
243398
Bacillota
TTC
Glu
>WENV180118831
OASD01001284
235142
Bacillota
CTT
Lys
>WENV180118969
OASD01004292
37588
Bacillota
TGA
Ser
>WENV180119349
OASD01048514
154711
Bacillota
TGG
Pro
>WENV180119447
OASD01099327
154711
Bacillota
TGG
Pro
>WENV180119354
OASD01049966
85288
Bacillota
GTA
Tyr
>WENV180118713
OASD01000476
286963
Bacillota
CTT
Lys
>WENV180118718
OASD01000532
340080
Bacillota
CCT
Arg
>WENV180119378
OASD01057779
152051
Bacillota
ACG
Arg
>WENV180118861
OASD01002033
243401
Bacillota
CGT
Thr
>WENV180119129
OASD01012031
163943
Bacillota
GTC
Asp
>WENV180119394
OASD01064638
241526
Bacillota
CTT
Lys
>WENV180119240
OASD01024244
144652
Bacillota
GTC
Asp
>WENV180119126
OASD01011874
238746
Bacillota
CGT
Thr
>WENV180119402
OASD01067290
235171
Bacillota
CCA
Trp
>WENV180119249
OASD01026017
238747
Bacillota
GTG
His
>WENV180119152
OASD01014039
281472
Bacillota
GGT
Thr
>WENV180119050
OASD01006870
242686
Bacillota
TGC
Ala
>WENV180119308
OASD01037460
242686
Bacillota
TGC
Ala
>WENV180119359
OASD01051141
95563
Bacillota
GTA
Tyr
>WENV180119195
OASD01019098
338127
Bacillota
TTG
Gln
>WENV180119343
OASD01046766
272488
Bacillota
GAA
Phe
>WENV180119169
OASD01015881
292012
Bacillota
TGC
Ala
>WENV180119200
OASD01020373
292012
Bacillota
TGC
Ala
>WENV180119268
OASD01028807
413179
Bacillota
CCC
Gly
>WENV180118829
OASD01001283
60249
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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