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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
128 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180142051
OATV01000617
235146
Actinomycetota
CGT
Thr
>WENV180142094
OATV01001226
119475
Actinomycetota
TAA
Leu
>WENV180142245
OATV01012031
413566
Actinomycetota
CCC
Gly
>WENV180141860
OATV01000068
235347
Actinomycetota
GGC
Ala
>WENV180141861
OATV01000068
235347
Actinomycetota
GGC
Ala
>WENV180142034
OATV01000531
235347
Actinomycetota
GGC
Ala
>WENV180142035
OATV01000531
235347
Actinomycetota
GGC
Ala
>WENV180141882
OATV01000107
166493
Actinomycetota
CTT
Lys
>WENV180142026
OATV01000512
166493
Actinomycetota
CTT
Lys
>WENV180142032
OATV01000528
16400
Actinomycetota
GAG
Leu
>WENV180141925
OATV01000176
123202
Actinomycetota
ACG
Arg
>WENV180142080
OATV01001016
37070
Actinomycetota
CGA
Ser
>WENV180141979
OATV01000321
144600
Actinomycetota
TGG
Pro
>WENV180142048
OATV01000592
235194
Actinomycetota
GTG
His
>WENV180142020
OATV01000501
273786
Actinomycetota
CGT
Thr
>WENV180141862
OATV01000068
158720
Actinomycetota
ACG
Arg
>WENV180141863
OATV01000068
158720
Actinomycetota
ACG
Arg
>WENV180141890
OATV01000125
158720
Actinomycetota
ACG
Arg
>WENV180142126
OATV01001984
158720
Actinomycetota
ACG
Arg
>WENV180142152
OATV01002755
161605
Actinomycetota
CAT
Met
>WENV180142266
OATV01019605
96367
Actinomycetota
GTA
Tyr
>WENV180141964
OATV01000278
144826
Actinomycetota
GGG
Pro
>WENV180142103
OATV01001343
144826
Actinomycetota
GGG
Pro
>WENV180141847
OATV01000051
23370
Actinomycetota
GCT
Ser
>WENV180142031
OATV01000520
23370
Actinomycetota
GCT
Ser
>WENV180141877
OATV01000106
174149
Actinomycetota
GAT
Ile
>WENV180142038
OATV01000547
174149
Actinomycetota
GAT
Ile
>WENV180141851
OATV01000052
338239
Actinomycetota
TTC
Glu
>WENV180142077
OATV01000974
338239
Actinomycetota
TTC
Glu
>WENV180142110
OATV01001498
338239
Actinomycetota
TTC
Glu
>WENV180141953
OATV01000233
16219
Actinomycetota
GCT
Ser
>WENV180141878
OATV01000106
235174
Actinomycetota
TGC
Ala
>WENV180141906
OATV01000142
235174
Actinomycetota
TGC
Ala
>WENV180142039
OATV01000547
235174
Actinomycetota
TGC
Ala
>WENV180141866
OATV01000086
235101
Actinomycetota
TTT
Lys
>WENV180141885
OATV01000118
235101
Actinomycetota
TTT
Lys
>WENV180142076
OATV01000954
235101
Actinomycetota
TTT
Lys
>WENV180142128
OATV01002064
235101
Actinomycetota
TTT
Lys
>WENV180141947
OATV01000224
121510
Actinomycetota
TAA
Leu
>WENV180141982
OATV01000334
356045
Actinomycetota
GAC
Val
>WENV180142011
OATV01000435
356045
Actinomycetota
GAC
Val
>WENV180142208
OATV01007018
154640
Actinomycetota
CTT
Lys
>WENV180141935
OATV01000182
145345
Actinomycetota
TAC
Val
>WENV180142006
OATV01000408
145345
Actinomycetota
TAC
Val
>WENV180141983
OATV01000334
235199
Actinomycetota
CAC
Val
>WENV180142012
OATV01000435
235199
Actinomycetota
CAC
Val
>WENV180142101
OATV01001302
149271
Actinomycetota
CAT
Met
>WENV180142213
OATV01007632
246015
Actinomycetota
GTG
His
>WENV180142017
OATV01000473
44862
Actinomycetota
CGA
Ser
>WENV180142201
OATV01006040
239204
Actinomycetota
CTT
Lys
>WENV180141920
OATV01000172
413665
Actinomycetota
TTG
Gln
>WENV180141978
OATV01000321
413665
Actinomycetota
TTG
Gln
>WENV180142033
OATV01000531
413665
Actinomycetota
TTG
Gln
>WENV180141968
OATV01000289
45154
Actinomycetota
TGA
Ser
>WENV180141865
OATV01000073
254857
Actinomycetota
CCG
Arg
>WENV180142114
OATV01001605
254857
Actinomycetota
CCG
Arg
>WENV180142141
OATV01002392
144593
Actinomycetota
TAT
Ile
>WENV180142019
OATV01000493
113703
Actinomycetota
TAG
Leu
>WENV180141846
OATV01000051
144700
Actinomycetota
CAT
Met
>WENV180142177
OATV01003391
235388
Actinomycetota
GTG
His
>WENV180141912
OATV01000155
243671
Actinomycetota
CTC
Glu
>WENV180142000
OATV01000390
243671
Actinomycetota
CTC
Glu
>WENV180142064
OATV01000742
243671
Actinomycetota
CTC
Glu
>WENV180141980
OATV01000333
45147
Actinomycetota
CGA
Ser
>WENV180142242
OATV01012002
98279
Actinomycetota
GTA
Tyr
>WENV180142001
OATV01000390
338148
Actinomycetota
CTG
Gln
>WENV180142065
OATV01000742
338148
Actinomycetota
CTG
Gln
>WENV180141874
OATV01000102
235148
Actinomycetota
GTT
Asn
>WENV180141939
OATV01000199
235148
Actinomycetota
GTT
Asn
>WENV180141940
OATV01000199
235148
Actinomycetota
GTT
Asn
>WENV180142250
OATV01015741
235148
Actinomycetota
GTT
Asn
>WENV180142109
OATV01001495
163710
Actinomycetota
CGG
Pro
>WENV180141945
OATV01000221
237792
Actinomycetota
CCT
Arg
>WENV180142084
OATV01001084
113702
Actinomycetota
TAA
Leu
>WENV180142198
OATV01005438
37359
Actinomycetota
>WENV180141850
OATV01000052
144825
Actinomycetota
CAT
Met
>WENV180142086
OATV01001148
144825
Actinomycetota
CAT
Met
>WENV180142045
OATV01000576
412384
Actinomycetota
CCC
Gly
>WENV180142235
OATV01010998
345170
Actinomycetota
TTG
Gln
>WENV180142184
OATV01003720
152190
Actinomycetota
GAT
Ile
>WENV180141902
OATV01000134
412399
Actinomycetota
CCC
Gly
>WENV180141909
OATV01000150
119508
Actinomycetota
TAA
Leu
>WENV180142053
OATV01000630
162402
Actinomycetota
GGG
Pro
>WENV180141918
OATV01000167
235348
Actinomycetota
CCT
Arg
>WENV180141928
OATV01000176
37521
Actinomycetota
GCT
Ser
>WENV180141942
OATV01000203
237794
Actinomycetota
CCG
Arg
>WENV180141943
OATV01000206
411554
Actinomycetota
CCC
Gly
>WENV180142021
OATV01000501
113601
Actinomycetota
TAG
Leu
>WENV180141868
OATV01000091
144595
Actinomycetota
CAA
Leu
>WENV180141949
OATV01000230
144595
Actinomycetota
CAA
Leu
>WENV180142030
OATV01000516
144595
Actinomycetota
CAA
Leu
>WENV180142115
OATV01001611
145343
Actinomycetota
GGG
Pro
>WENV180142104
OATV01001360
235149
Actinomycetota
CCT
Arg
>WENV180142227
OATV01008791
59716
Actinomycetota
CAG
Leu
>WENV180142145
OATV01002449
246365
Actinomycetota
ACG
Arg
>WENV180142018
OATV01000493
235121
Actinomycetota
CGT
Thr
>WENV180142129
OATV01002068
97120
Actinomycetota
GTA
Tyr
>WENV180141870
OATV01000092
47164
Actinomycetota
GGA
Ser
>WENV180141886
OATV01000118
47164
Actinomycetota
GGA
Ser
>WENV180142075
OATV01000921
47164
Actinomycetota
GGA
Ser
>WENV180142189
OATV01004579
235575
Actinomycetota
CTC
Glu
>WENV180141908
OATV01000144
45852
Actinomycetota
CGA
Ser
>WENV180142052
OATV01000619
236216
Actinomycetota
GGC
Ala
>WENV180141901
OATV01000134
80622
Actinomycetota
CAG
Leu
>WENV180142002
OATV01000394
80622
Actinomycetota
CAG
Leu
>WENV180142171
OATV01002847
80622
Actinomycetota
CAG
Leu
>WENV180142173
OATV01002922
80622
Actinomycetota
CAG
Leu
>WENV180141875
OATV01000103
345416
Actinomycetota
CTG
Gln
>WENV180142143
OATV01002415
345416
Actinomycetota
CTG
Gln
>WENV180142190
OATV01004647
44851
Actinomycetota
TGA
Ser
>WENV180141913
OATV01000155
356597
Actinomycetota
CTG
Gln
>WENV180141867
OATV01000087
16222
Actinomycetota
GAG
Leu
>WENV180142009
OATV01000415
163948
Actinomycetota
CAT
Met
>WENV180141881
OATV01000107
235173
Actinomycetota
GGC
Ala
>WENV180141919
OATV01000172
235173
Actinomycetota
GGC
Ala
>WENV180142046
OATV01000579
243162
Actinomycetota
GTT
Asn
>WENV180141873
OATV01000102
243162
Actinomycetota
GTT
Asn
>WENV180141914
OATV01000159
243162
Actinomycetota
GTT
Asn
>WENV180142132
OATV01002133
144660
Actinomycetota
TAC
Val
>WENV180141929
OATV01000176
411599
Actinomycetota
TTG
Gln
>WENV180141960
OATV01000271
183544
Actinomycetota
CAT
Met
>WENV180141880
OATV01000107
267574
Actinomycetota
CAC
Val
>WENV180141954
OATV01000250
267574
Actinomycetota
CAC
Val
>WENV180141845
OATV01000051
95593
Actinomycetota
>WENV180142007
OATV01000409
95593
Actinomycetota
>WENV180141915
OATV01000161
144823
Actinomycetota
TCT
Arg
>WENV180141993
OATV01000353
144823
Actinomycetota
TCT
Arg
>WENV180141999
OATV01000379
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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