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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180291609
OBIV01100185
238673
Bacteroidota
GAA
Phe
>WENV180291535
OBIV01077068
150845
Bacteroidota
GTC
Asp
>WENV180291498
OBIV01069033
151513
Bacteroidota
TGC
Ala
>WENV180292707
OBIV01585237
412490
Bacteroidota
CCA
Trp
>WENV180292621
OBIV01538726
237362
Bacteroidota
TGT
Thr
>WENV180292335
OBIV01399753
161504
Bacteroidota
TGC
Ala
>WENV180291904
OBIV01220898
47173
Bacteroidota
TGA
Ser
>WENV180292134
OBIV01322750
236699
Bacteroidota
TTG
Gln
>WENV180291620
OBIV01103700
145555
Bacteroidota
GTC
Asp
>WENV180292094
OBIV01307826
128548
Bacteroidota
TAC
Val
>WENV180291821
OBIV01189185
255845
Bacteroidota
>WENV180291623
OBIV01106001
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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