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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180309555
OBJS01007371
351461
Alphaproteobacteria
TTG
Gln
>WENV180309864
OBJS01064466
99726
Alphaproteobacteria
TAG
Leu
>WENV180309948
OBJS01099478
300133
Alphaproteobacteria
TAC
Val
>WENV180310012
OBJS01136538
193550
Alphaproteobacteria
TCT
Arg
>WENV180309497
OBJS01002792
195945
Alphaproteobacteria
GAT
Ile
>WENV180309619
OBJS01011333
96210
Alphaproteobacteria
TAG
Leu
>WENV180309294
OBJS01000030
182651
Alphaproteobacteria
GTC
Asp
>WENV180310150
OBJS01265052
339846
Alphaproteobacteria
GAC
Val
>WENV180309498
OBJS01002792
251610
Alphaproteobacteria
TGC
Ala
>WENV180310036
OBJS01157458
147334
Alphaproteobacteria
CAT
Met
>WENV180309841
OBJS01056294
99414
Alphaproteobacteria
GTA
Tyr
>WENV180310091
OBJS01210789
157999
Alphaproteobacteria
TCT
Arg
>WENV180309816
OBJS01047227
192195
Alphaproteobacteria
GTC
Asp
>WENV180309277
OBJS01000013
258175
Alphaproteobacteria
CGC
Ala
>WENV180309300
OBJS01000034
424918
Alphaproteobacteria
TCC
Gly
>WENV180309867
OBJS01065762
352191
Alphaproteobacteria
GGT
Thr
>WENV180309296
OBJS01000032
150356
Alphaproteobacteria
GTC
Asp
>WENV180309349
OBJS01000089
236045
Alphaproteobacteria
CGT
Thr
>WENV180309330
OBJS01000052
259072
Alphaproteobacteria
CGC
Ala
>WENV180310245
OBJS01362136
342846
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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