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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180309823
OBJS01050516
183605
Gammaproteobacteria
CCG
Arg
>WENV180310288
OBJS01413864
199859
Gammaproteobacteria
CAT
Met
>WENV180309733
OBJS01028173
115067
Gammaproteobacteria
GTA
Tyr
>WENV180309572
OBJS01008542
281920
Gammaproteobacteria
CCA
Trp
>WENV180310201
OBJS01303335
290337
Gammaproteobacteria
TAC
Val
>WENV180309556
OBJS01007462
269248
Gammaproteobacteria
CCA
Trp
>WENV180309722
OBJS01027114
240619
Gammaproteobacteria
TGT
Thr
>WENV180309784
OBJS01039750
146791
Gammaproteobacteria
GAC
Val
>WENV180309538
OBJS01005539
235544
Gammaproteobacteria
GTG
His
>WENV180310269
OBJS01391769
95983
Gammaproteobacteria
>WENV180309389
OBJS01000292
245841
Gammaproteobacteria
GAA
Phe
>WENV180310236
OBJS01354303
189955
Gammaproteobacteria
GAT
Ile
>WENV180309282
OBJS01000019
44872
Gammaproteobacteria
GGA
Ser
>WENV180310233
OBJS01353467
237412
Gammaproteobacteria
TAC
Val
>WENV180309549
OBJS01006912
106361
Gammaproteobacteria
TAG
Leu
>WENV180310304
OBJS01440846
313860
Gammaproteobacteria
GGC
Ala
>WENV180309640
OBJS01013396
341782
Gammaproteobacteria
TTG
Gln
>WENV180309457
OBJS01001426
311863
Gammaproteobacteria
GGC
Ala
>WENV180309794
OBJS01041417
238372
Gammaproteobacteria
CCT
Arg
>WENV180309920
OBJS01088490
195303
Gammaproteobacteria
GAT
Ile
>WENV180309708
OBJS01023335
63563
Gammaproteobacteria
CAG
Leu
>WENV180309592
OBJS01009010
243485
Gammaproteobacteria
TGT
Thr
>WENV180309272
OBJS01000009
17108
Gammaproteobacteria
GCT
Ser
>WENV180309732
OBJS01028173
237421
Gammaproteobacteria
TGT
Thr
>WENV180309557
OBJS01007514
203054
Gammaproteobacteria
ACG
Arg
>WENV180309381
OBJS01000210
411735
Gammaproteobacteria
GCA
Cys
>WENV180309536
OBJS01005539
198797
Gammaproteobacteria
TGG
Pro
>WENV180309627
OBJS01012028
150183
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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