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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180358146
OBNP01002681
306171
Gammaproteobacteria
TGC
Ala
>WENV180358121
OBNP01001120
300945
Gammaproteobacteria
TGT
Thr
>WENV180358171
OBNP01005175
46594
Gammaproteobacteria
GGA
Ser
>WENV180358123
OBNP01001338
147647
Gammaproteobacteria
CAT
Met
>WENV180358559
OBNP01098134
185163
Gammaproteobacteria
ACG
Arg
>WENV180358516
OBNP01083407
148044
Gammaproteobacteria
GAC
Val
>WENV180358452
OBNP01065220
149036
Gammaproteobacteria
CCA
Trp
>WENV180358223
OBNP01012069
148148
Gammaproteobacteria
GAC
Val
>WENV180358440
OBNP01060123
202944
Gammaproteobacteria
TGG
Pro
>WENV180358480
OBNP01072214
8664
Gammaproteobacteria
GCT
Ser
>WENV180358474
OBNP01069705
240084
Gammaproteobacteria
GGT
Thr
>WENV180358544
OBNP01091133
95613
Gammaproteobacteria
CAA
Leu
>WENV180358119
OBNP01000797
236248
Gammaproteobacteria
TTT
Lys
>WENV180358088
OBNP01000045
247088
Gammaproteobacteria
CCA
Trp
>WENV180358196
OBNP01008480
17379
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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