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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180364164
OBNZ01115793
248021
Alphaproteobacteria
CTT
Lys
>WENV180364091
OBNZ01081830
254294
Alphaproteobacteria
>WENV180364197
OBNZ01131309
350475
Alphaproteobacteria
GGT
Thr
>WENV180363975
OBNZ01035083
58865
Alphaproteobacteria
GAG
Leu
>WENV180363747
OBNZ01003653
113700
Alphaproteobacteria
>WENV180364232
OBNZ01160506
338283
Alphaproteobacteria
CAC
Val
>WENV180364051
OBNZ01064531
23561
Alphaproteobacteria
GGA
Ser
>WENV180363886
OBNZ01018649
338282
Alphaproteobacteria
GTT
Asn
>WENV180363877
OBNZ01018074
147083
Alphaproteobacteria
GGG
Pro
>WENV180364139
OBNZ01104070
165860
Alphaproteobacteria
TGG
Pro
>WENV180363925
OBNZ01025897
339846
Alphaproteobacteria
GAC
Val
>WENV180364113
OBNZ01095448
413626
Alphaproteobacteria
TCC
Gly
>WENV180363743
OBNZ01003404
113716
Alphaproteobacteria
CAA
Leu
>WENV180363994
OBNZ01041094
339725
Alphaproteobacteria
GAA
Phe
>WENV180364236
OBNZ01162974
153154
Alphaproteobacteria
TAC
Val
>WENV180364218
OBNZ01148953
342876
Alphaproteobacteria
GAC
Val
>WENV180364073
OBNZ01073519
148083
Alphaproteobacteria
ACG
Arg
>WENV180363912
OBNZ01023337
341164
Alphaproteobacteria
GCC
Gly
>WENV180363810
OBNZ01008717
237281
Alphaproteobacteria
CGT
Thr
>WENV180363804
OBNZ01008222
65244
Alphaproteobacteria
CAG
Leu
>WENV180364143
OBNZ01105683
10642
Alphaproteobacteria
GCT
Ser
>WENV180363935
OBNZ01027133
147283
Alphaproteobacteria
GTG
His
>WENV180363799
OBNZ01007691
412424
Alphaproteobacteria
TCC
Gly
>WENV180363777
OBNZ01006151
150356
Alphaproteobacteria
GTC
Asp
>WENV180363894
OBNZ01019594
236256
Alphaproteobacteria
TAC
Val
>WENV180363786
OBNZ01006865
237579
Alphaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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