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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180370431
OBOH01097307
152464
Actinomycetota
CAT
Met
>WENV180370572
OBOH01133500
413688
Actinomycetota
CCC
Gly
>WENV180370375
OBOH01084328
417087
Actinomycetota
CCC
Gly
>WENV180369923
OBOH01010950
146607
Actinomycetota
GTC
Asp
>WENV180369959
OBOH01014113
236241
Actinomycetota
TAC
Val
>WENV180370274
OBOH01058147
425058
Actinomycetota
GCA
Cys
>WENV180370276
OBOH01058293
104906
Actinomycetota
GTA
Tyr
>WENV180370156
OBOH01035645
81941
Actinomycetota
CAG
Leu
>WENV180370275
OBOH01058147
344380
Actinomycetota
GAC
Val
>WENV180369815
OBOH01003867
56123
Actinomycetota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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