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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180376638
OBOM01044800
165250
Alphaproteobacteria
TGG
Pro
>WENV180376793
OBOM01094131
365250
Alphaproteobacteria
GCC
Gly
>WENV180376643
OBOM01046192
237493
Alphaproteobacteria
CCA
Trp
>WENV180376249
OBOM01000031
147089
Alphaproteobacteria
ACG
Arg
>WENV180376744
OBOM01069399
412917
Alphaproteobacteria
TCC
Gly
>WENV180376676
OBOM01051723
66752
Alphaproteobacteria
CAG
Leu
>WENV180376248
OBOM01000022
113700
Alphaproteobacteria
>WENV180376701
OBOM01058626
83401
Alphaproteobacteria
TAA
Leu
>WENV180376270
OBOM01000273
256175
Alphaproteobacteria
TGT
Thr
>WENV180376426
OBOM01007594
146875
Alphaproteobacteria
GTG
His
>WENV180376386
OBOM01004475
282595
Alphaproteobacteria
CCA
Trp
>WENV180376395
OBOM01005216
435528
Alphaproteobacteria
GCA
Cys
>WENV180376273
OBOM01000309
338282
Alphaproteobacteria
GTT
Asn
>WENV180377031
OBOM01199188
340288
Alphaproteobacteria
GCC
Gly
>WENV180376245
OBOM01000009
339722
Alphaproteobacteria
TTG
Gln
>WENV180376436
OBOM01008101
237740
Alphaproteobacteria
TTT
Lys
>WENV180376272
OBOM01000309
147334
Alphaproteobacteria
CAT
Met
>WENV180376423
OBOM01007478
241518
Alphaproteobacteria
CCA
Trp
>WENV180376842
OBOM01112308
82948
Alphaproteobacteria
CAA
Leu
>WENV180376539
OBOM01023368
421064
Alphaproteobacteria
CCC
Gly
>WENV180376325
OBOM01001665
177001
Alphaproteobacteria
TCT
Arg
>WENV180376252
OBOM01000062
339606
Alphaproteobacteria
>WENV180376247
OBOM01000022
412424
Alphaproteobacteria
TCC
Gly
>WENV180376781
OBOM01090836
237474
Alphaproteobacteria
CCA
Trp
>WENV180376779
OBOM01090163
377327
Alphaproteobacteria
GCC
Gly
>WENV180376930
OBOM01157650
147286
Alphaproteobacteria
CGG
Pro
>WENV180377029
OBOM01197849
147088
Alphaproteobacteria
CCT
Arg
>WENV180376742
OBOM01068307
113767
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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