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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180456577
OBXR01000021
243647
Bacillota
TTT
Lys
>WENV180456585
OBXR01000021
243647
Bacillota
TTT
Lys
>WENV180456520
OBXR01000003
26899
Bacillota
GGA
Ser
>WENV180456682
OBXR01003400
361659
Bacillota
GCC
Gly
>WENV180456539
OBXR01000008
16842
Bacillota
CGA
Ser
>WENV180456581
OBXR01000021
235693
Bacillota
GGT
Thr
>WENV180456679
OBXR01003400
354367
Bacillota
TTG
Gln
>WENV180456713
OBXR01007188
97943
Bacillota
GTA
Tyr
>WENV180456734
OBXR01010307
97943
Bacillota
GTA
Tyr
>WENV180456521
OBXR01000003
419288
Bacillota
GGT
Thr
>WENV180456730
OBXR01010295
145606
Bacillota
GTC
Asp
>WENV180456571
OBXR01000020
16834
Bacillota
GCT
Ser
>WENV180456594
OBXR01000025
268272
Bacillota
TGC
Ala
>WENV180456513
OBXR01000001
114002
Bacillota
CAA
Leu
>WENV180456726
OBXR01008586
338550
Bacillota
>WENV180456656
OBXR01000608
114284
Bacillota
CAA
Leu
>WENV180456506
OBXR01000001
37437
Bacillota
TAA
Leu
>WENV180456574
OBXR01000021
243612
Bacillota
TAC
Val
>WENV180456587
OBXR01000021
243612
Bacillota
TAC
Val
>WENV180456654
OBXR01000556
173810
Bacillota
CAT
Met
>WENV180456508
OBXR01000001
147135
Bacillota
ACG
Arg
>WENV180456729
OBXR01010295
263765
Bacillota
TAC
Val
>WENV180456512
OBXR01000001
342895
Bacillota
CAT
Met
>WENV180456684
OBXR01003400
150597
Bacillota
TCT
Arg
>WENV180456503
OBXR01000001
250349
Bacillota
GAA
Phe
>WENV180456534
OBXR01000008
250349
Bacillota
GAA
Phe
>WENV180456502
OBXR01000001
235197
Bacillota
GTC
Asp
>WENV180456533
OBXR01000008
235197
Bacillota
GTC
Asp
>WENV180456671
OBXR01002190
342833
Bacillota
GTT
Asn
>WENV180456683
OBXR01003400
411739
Bacillota
TCC
Gly
>WENV180456703
OBXR01006088
235638
Bacillota
GAA
Phe
>WENV180456680
OBXR01003400
237963
Bacillota
TTT
Lys
>WENV180456575
OBXR01000021
243613
Bacillota
GTG
His
>WENV180456582
OBXR01000021
152491
Bacillota
CAT
Met
>WENV180456736
OBXR01010399
353527
Bacillota
TTC
Glu
>WENV180456668
OBXR01001624
248507
Bacillota
CAT
Met
>WENV180456514
OBXR01000001
413657
Bacillota
CCC
Gly
>WENV180456576
OBXR01000021
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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