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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
193 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180494558
OCAA01000452
196621
Bacillota
GTC
Asp
>WENV180494880
OCAA01001550
196621
Bacillota
GTC
Asp
>WENV180495107
OCAA01006047
361659
Bacillota
GCC
Gly
>WENV180495109
OCAA01006047
361659
Bacillota
GCC
Gly
>WENV180495386
OCAA01076347
16842
Bacillota
CGA
Ser
>WENV180494694
OCAA01000727
309417
Bacillota
GGC
Ala
>WENV180494441
OCAA01000249
144612
Bacillota
TCT
Arg
>WENV180494128
OCAA01000001
267649
Bacillota
TAC
Val
>WENV180495052
OCAA01003621
267649
Bacillota
TAC
Val
>WENV180494743
OCAA01000886
235134
Bacillota
GAA
Phe
>WENV180495233
OCAA01019683
235287
Bacillota
TTT
Lys
>WENV180494510
OCAA01000360
235098
Bacillota
GAC
Val
>WENV180494643
OCAA01000612
235098
Bacillota
GAC
Val
>WENV180494437
OCAA01000247
338152
Bacillota
TTC
Glu
>WENV180494843
OCAA01001370
98228
Bacillota
TAG
Leu
>WENV180495245
OCAA01020109
237387
Bacillota
TGT
Thr
>WENV180495371
OCAA01063469
250201
Bacillota
TGC
Ala
>WENV180494548
OCAA01000450
338544
Bacillota
TGT
Thr
>WENV180494555
OCAA01000450
338544
Bacillota
TGT
Thr
>WENV180494921
OCAA01001800
338544
Bacillota
TGT
Thr
>WENV180495420
OCAA01110723
338544
Bacillota
TGT
Thr
>WENV180494397
OCAA01000196
148239
Bacillota
TCT
Arg
>WENV180494627
OCAA01000600
148239
Bacillota
TCT
Arg
>WENV180494653
OCAA01000655
44854
Bacillota
TGA
Ser
>WENV180495331
OCAA01053116
235154
Bacillota
GTT
Asn
>WENV180494557
OCAA01000452
304022
Bacillota
GCC
Gly
>WENV180494559
OCAA01000452
304022
Bacillota
GCC
Gly
>WENV180494695
OCAA01000727
304022
Bacillota
GCC
Gly
>WENV180495435
OCAA01112788
304022
Bacillota
GCC
Gly
>WENV180494150
OCAA01000009
59312
Bacillota
CAG
Leu
>WENV180494272
OCAA01000091
59312
Bacillota
CAG
Leu
>WENV180494517
OCAA01000375
59312
Bacillota
CAG
Leu
>WENV180495429
OCAA01111174
238910
Bacillota
CTT
Lys
>WENV180494657
OCAA01000661
97943
Bacillota
GTA
Tyr
>WENV180494247
OCAA01000074
338147
Bacillota
CTC
Glu
>WENV180494595
OCAA01000535
338147
Bacillota
CTC
Glu
>WENV180494716
OCAA01000794
338147
Bacillota
CTC
Glu
>WENV180495182
OCAA01010993
235150
Bacillota
TGC
Ala
>WENV180495223
OCAA01017696
235150
Bacillota
TGC
Ala
>WENV180495251
OCAA01020519
235137
Bacillota
TGC
Ala
>WENV180495343
OCAA01056789
391536
Bacillota
TTC
Glu
>WENV180495300
OCAA01042356
235294
Bacillota
TGC
Ala
>WENV180495309
OCAA01045000
235294
Bacillota
TGC
Ala
>WENV180494777
OCAA01001101
340802
Bacillota
TTG
Gln
>WENV180494958
OCAA01002217
340802
Bacillota
TTG
Gln
>WENV180494915
OCAA01001778
235114
Bacillota
TTT
Lys
>WENV180495090
OCAA01005066
235114
Bacillota
TTT
Lys
>WENV180494623
OCAA01000583
388249
Bacillota
GCA
Cys
>WENV180495304
OCAA01044100
144668
Bacillota
GTC
Asp
>WENV180494572
OCAA01000483
429429
Bacillota
CCA
Trp
>WENV180494639
OCAA01000606
429429
Bacillota
CCA
Trp
>WENV180495281
OCAA01031886
429429
Bacillota
CCA
Trp
>WENV180494281
OCAA01000096
313454
Bacillota
GAA
Phe
>WENV180494393
OCAA01000195
313454
Bacillota
GAA
Phe
>WENV180494433
OCAA01000245
313454
Bacillota
GAA
Phe
>WENV180494763
OCAA01001077
313454
Bacillota
GAA
Phe
>WENV180495077
OCAA01004547
313454
Bacillota
GAA
Phe
>WENV180494389
OCAA01000192
41154
Bacillota
TAA
Leu
>WENV180494270
OCAA01000091
44859
Bacillota
AAG
Leu
>WENV180494271
OCAA01000091
44859
Bacillota
AAG
Leu
>WENV180495180
OCAA01010674
16834
Bacillota
GCT
Ser
>WENV180494547
OCAA01000450
186380
Bacillota
GTC
Asp
>WENV180494551
OCAA01000450
186380
Bacillota
GTC
Asp
>WENV180494554
OCAA01000450
186380
Bacillota
GTC
Asp
>WENV180494920
OCAA01001800
186380
Bacillota
GTC
Asp
>WENV180494384
OCAA01000190
11034
Bacillota
GGA
Ser
>WENV180494696
OCAA01000727
235117
Bacillota
TAC
Val
>WENV180495419
OCAA01110677
235117
Bacillota
TAC
Val
>WENV180494398
OCAA01000196
156937
Bacillota
GTG
His
>WENV180494776
OCAA01001101
156937
Bacillota
GTG
His
>WENV180495232
OCAA01019683
235290
Bacillota
TTG
Gln
>WENV180494498
OCAA01000336
338550
Bacillota
>WENV180494499
OCAA01000336
338550
Bacillota
>WENV180494556
OCAA01000452
235079
Bacillota
GAA
Phe
>WENV180495351
OCAA01059266
144763
Bacillota
TGG
Pro
>WENV180495369
OCAA01062224
162028
Bacillota
ACG
Arg
>WENV180495344
OCAA01056789
243612
Bacillota
TAC
Val
>WENV180495126
OCAA01006587
338149
Bacillota
CTC
Glu
>WENV180495236
OCAA01019683
144766
Bacillota
CAT
Met
>WENV180495153
OCAA01008304
245298
Bacillota
CGG
Pro
>WENV180494212
OCAA01000047
37269
Bacillota
TGA
Ser
>WENV180494567
OCAA01000472
37269
Bacillota
TGA
Ser
>WENV180494591
OCAA01000508
37269
Bacillota
TGA
Ser
>WENV180494200
OCAA01000039
155089
Bacillota
CAT
Met
>WENV180494436
OCAA01000247
287000
Bacillota
GTT
Asn
>WENV180495350
OCAA01058206
287000
Bacillota
GTT
Asn
>WENV180494714
OCAA01000782
258936
Bacillota
GGT
Thr
>WENV180494432
OCAA01000245
169968
Bacillota
CAT
Met
>WENV180494474
OCAA01000319
169968
Bacillota
CAT
Met
>WENV180495105
OCAA01006047
115075
Bacillota
TAG
Leu
>WENV180495320
OCAA01049034
173810
Bacillota
CAT
Met
>WENV180494250
OCAA01000077
162445
Bacillota
CAT
Met
>WENV180494252
OCAA01000077
162445
Bacillota
CAT
Met
>WENV180495012
OCAA01003106
152492
Bacillota
GGG
Pro
>WENV180495057
OCAA01003685
152492
Bacillota
GGG
Pro
>WENV180494632
OCAA01000605
144599
Bacillota
GTC
Asp
>WENV180494781
OCAA01001113
144599
Bacillota
GTC
Asp
>WENV180494895
OCAA01001618
144599
Bacillota
GTC
Asp
>WENV180494903
OCAA01001702
144599
Bacillota
GTC
Asp
>WENV180494192
OCAA01000034
100326
Bacillota
GTA
Tyr
>WENV180494348
OCAA01000154
100326
Bacillota
GTA
Tyr
>WENV180494369
OCAA01000179
100326
Bacillota
GTA
Tyr
>WENV180494635
OCAA01000605
100326
Bacillota
GTA
Tyr
>WENV180494704
OCAA01000758
100326
Bacillota
GTA
Tyr
>WENV180494816
OCAA01001194
100326
Bacillota
GTA
Tyr
>WENV180494628
OCAA01000600
144610
Bacillota
GTG
His
>WENV180494913
OCAA01001778
144610
Bacillota
GTG
His
>WENV180494957
OCAA01002217
144610
Bacillota
GTG
His
>WENV180494497
OCAA01000336
353537
Bacillota
GTT
Asn
>WENV180494500
OCAA01000336
353537
Bacillota
GTT
Asn
>WENV180494655
OCAA01000658
353537
Bacillota
GTT
Asn
>WENV180494744
OCAA01000886
240017
Bacillota
GCC
Gly
>WENV180494241
OCAA01000070
411547
Bacillota
CTG
Gln
>WENV180495152
OCAA01008304
411547
Bacillota
CTG
Gln
>WENV180494423
OCAA01000230
147684
Bacillota
ACG
Arg
>WENV180494654
OCAA01000655
4624
Bacillota
GCT
Ser
>WENV180494546
OCAA01000450
263765
Bacillota
TAC
Val
>WENV180494550
OCAA01000450
263765
Bacillota
TAC
Val
>WENV180494553
OCAA01000450
263765
Bacillota
TAC
Val
>WENV180494741
OCAA01000886
263765
Bacillota
TAC
Val
>WENV180494919
OCAA01001800
263765
Bacillota
TAC
Val
>WENV180495392
OCAA01081291
263765
Bacillota
TAC
Val
>WENV180495426
OCAA01110937
411584
Bacillota
TCC
Gly
>WENV180494879
OCAA01001550
235095
Bacillota
GGT
Thr
>WENV180494881
OCAA01001550
235095
Bacillota
GGT
Thr
>WENV180495360
OCAA01060616
239832
Bacillota
TGT
Thr
>WENV180495367
OCAA01062084
198159
Bacillota
CAT
Met
>WENV180494775
OCAA01001101
152151
Bacillota
TCT
Arg
>WENV180495249
OCAA01020109
37193
Bacillota
TAA
Leu
>WENV180495183
OCAA01011020
166468
Bacillota
TCG
Arg
>WENV180495414
OCAA01110347
235289
Bacillota
GTT
Asn
>WENV180494561
OCAA01000452
411549
Bacillota
TTG
Gln
>WENV180494268
OCAA01000085
235142
Bacillota
CTT
Lys
>WENV180495027
OCAA01003216
235142
Bacillota
CTT
Lys
>WENV180495352
OCAA01059266
144767
Bacillota
GTG
His
>WENV180494845
OCAA01001370
258997
Bacillota
CTT
Lys
>WENV180494947
OCAA01002121
148188
Bacillota
CCG
Arg
>WENV180494953
OCAA01002216
148188
Bacillota
CCG
Arg
>WENV180495358
OCAA01059742
236012
Bacillota
GTC
Asp
>WENV180494230
OCAA01000064
256380
Bacillota
>WENV180494661
OCAA01000670
256380
Bacillota
>WENV180495413
OCAA01110338
368876
Bacillota
GCC
Gly
>WENV180494712
OCAA01000782
235638
Bacillota
GAA
Phe
>WENV180494806
OCAA01001152
235638
Bacillota
GAA
Phe
>WENV180494584
OCAA01000491
235124
Bacillota
TGG
Pro
>WENV180495368
OCAA01062084
235506
Bacillota
TGC
Ala
>WENV180495238
OCAA01019683
163753
Bacillota
TGG
Pro
>WENV180494332
OCAA01000138
237963
Bacillota
TTT
Lys
>WENV180495118
OCAA01006344
237963
Bacillota
TTT
Lys
>WENV180494329
OCAA01000138
201667
Bacillota
TCT
Arg
>WENV180495190
OCAA01011726
338129
Bacillota
TGT
Thr
>WENV180495423
OCAA01110844
436750
Bacillota
TCC
Gly
>WENV180494491
OCAA01000336
319167
Bacillota
CAT
Met
>WENV180494494
OCAA01000336
319167
Bacillota
CAT
Met
>WENV180495296
OCAA01041109
243613
Bacillota
GTG
His
>WENV180495095
OCAA01005251
144583
Bacillota
ACG
Arg
>WENV180494607
OCAA01000562
144652
Bacillota
GTC
Asp
>WENV180495084
OCAA01005066
144652
Bacillota
GTC
Asp
>WENV180494577
OCAA01000486
247734
Bacillota
TGC
Ala
>WENV180494350
OCAA01000154
238974
Bacillota
GAA
Phe
>WENV180494371
OCAA01000179
238974
Bacillota
GAA
Phe
>WENV180494637
OCAA01000605
238974
Bacillota
GAA
Phe
>WENV180494650
OCAA01000649
238974
Bacillota
GAA
Phe
>WENV180494852
OCAA01001428
238974
Bacillota
GAA
Phe
>WENV180494334
OCAA01000139
144621
Bacillota
GTT
Asn
>WENV180495127
OCAA01006587
144621
Bacillota
GTT
Asn
>WENV180494274
OCAA01000092
235113
Bacillota
GAA
Phe
>WENV180495089
OCAA01005066
235113
Bacillota
GAA
Phe
>WENV180495347
OCAA01057616
152491
Bacillota
CAT
Met
>WENV180494545
OCAA01000450
353527
Bacillota
TTC
Glu
>WENV180494549
OCAA01000450
353527
Bacillota
TTC
Glu
>WENV180494918
OCAA01001800
353527
Bacillota
TTC
Glu
>WENV180494755
OCAA01001013
58712
Bacillota
CAG
Leu
>WENV180494932
OCAA01001906
58712
Bacillota
CAG
Leu
>WENV180494908
OCAA01001745
21693
Bacillota
GCT
Ser
>WENV180495231
OCAA01019683
144762
Bacillota
TCT
Arg
>WENV180494552
OCAA01000450
401573
Bacillota
TTC
Glu
>WENV180494922
OCAA01001800
401573
Bacillota
TTC
Glu
>WENV180495006
OCAA01002914
272992
Bacillota
CTT
Lys
>WENV180495346
OCAA01057616
281472
Bacillota
GGT
Thr
>WENV180494956
OCAA01002217
157635
Bacillota
TCT
Arg
>WENV180495287
OCAA01036590
299139
Bacillota
TGC
Ala
>WENV180494509
OCAA01000360
144594
Bacillota
CAC
Val
>WENV180494427
OCAA01000235
95563
Bacillota
GTA
Tyr
>WENV180495087
OCAA01005066
95563
Bacillota
GTA
Tyr
>WENV180495284
OCAA01032845
413657
Bacillota
CCC
Gly
>WENV180494214
OCAA01000052
414486
Bacillota
CCC
Gly
>WENV180494238
OCAA01000067
114075
Bacillota
TAG
Leu
>WENV180494631
OCAA01000600
114075
Bacillota
TAG
Leu
>WENV180495243
OCAA01020109
146770
Bacillota
TTC
Glu
>WENV180494713
OCAA01000782
376360
Bacillota
GCA
Cys
>WENV180495297
OCAA01041109
343027
Bacillota
TTG
Gln
>WENV180494884
OCAA01001559
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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