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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180568005
OCLM01023986
24650
Bacillota
TAA
Leu
>WENV180568467
OCLM01147266
196621
Bacillota
GTC
Asp
>WENV180568540
OCLM01198428
361659
Bacillota
GCC
Gly
>WENV180568136
OCLM01049288
144612
Bacillota
TCT
Arg
>WENV180568096
OCLM01040798
267649
Bacillota
TAC
Val
>WENV180567842
OCLM01004467
235134
Bacillota
GAA
Phe
>WENV180568190
OCLM01059437
339890
Bacillota
TTG
Gln
>WENV180568028
OCLM01029068
156189
Bacillota
GAT
Ile
>WENV180568607
OCLM01240686
338152
Bacillota
TTC
Glu
>WENV180568329
OCLM01090637
148239
Bacillota
TCT
Arg
>WENV180568304
OCLM01082242
44854
Bacillota
TGA
Ser
>WENV180567999
OCLM01023986
235154
Bacillota
GTT
Asn
>WENV180568171
OCLM01056688
235154
Bacillota
GTT
Asn
>WENV180568064
OCLM01035529
144577
Bacillota
GAT
Ile
>WENV180568254
OCLM01072662
304022
Bacillota
GCC
Gly
>WENV180568591
OCLM01239240
304022
Bacillota
GCC
Gly
>WENV180568184
OCLM01059307
354367
Bacillota
TTG
Gln
>WENV180568186
OCLM01059307
113680
Bacillota
TAG
Leu
>WENV180568375
OCLM01106180
97943
Bacillota
GTA
Tyr
>WENV180568187
OCLM01059307
338208
Bacillota
>WENV180568299
OCLM01080584
340802
Bacillota
TTG
Gln
>WENV180568445
OCLM01138970
340802
Bacillota
TTG
Gln
>WENV180568633
OCLM01312002
340802
Bacillota
TTG
Gln
>WENV180567925
OCLM01012148
361897
Bacillota
CTC
Glu
>WENV180568426
OCLM01128001
341763
Bacillota
CTC
Glu
>WENV180568621
OCLM01305040
37083
Bacillota
TGA
Ser
>WENV180568288
OCLM01078048
144668
Bacillota
GTC
Asp
>WENV180568552
OCLM01207452
144668
Bacillota
GTC
Asp
>WENV180568003
OCLM01023986
198770
Bacillota
GTC
Asp
>WENV180568095
OCLM01040798
198770
Bacillota
GTC
Asp
>WENV180568043
OCLM01032621
313454
Bacillota
GAA
Phe
>WENV180568145
OCLM01052503
41154
Bacillota
TAA
Leu
>WENV180568548
OCLM01205728
186380
Bacillota
GTC
Asp
>WENV180568255
OCLM01072662
235117
Bacillota
TAC
Val
>WENV180568592
OCLM01239240
235117
Bacillota
TAC
Val
>WENV180568330
OCLM01090637
156937
Bacillota
GTG
His
>WENV180568452
OCLM01142511
156937
Bacillota
GTG
His
>WENV180568599
OCLM01240431
338550
Bacillota
>WENV180567776
OCLM01000219
235079
Bacillota
GAA
Phe
>WENV180568257
OCLM01072662
235079
Bacillota
GAA
Phe
>WENV180568344
OCLM01094411
235079
Bacillota
GAA
Phe
>WENV180568379
OCLM01108276
235079
Bacillota
GAA
Phe
>WENV180568411
OCLM01123081
235079
Bacillota
GAA
Phe
>WENV180568063
OCLM01035529
235087
Bacillota
TGC
Ala
>WENV180567997
OCLM01023383
338149
Bacillota
CTC
Glu
>WENV180568029
OCLM01029271
37269
Bacillota
TGA
Ser
>WENV180568117
OCLM01045353
37269
Bacillota
TGA
Ser
>WENV180568585
OCLM01236873
37269
Bacillota
TGA
Ser
>WENV180568120
OCLM01046746
287000
Bacillota
GTT
Asn
>WENV180568195
OCLM01060484
287000
Bacillota
GTT
Asn
>WENV180568606
OCLM01240686
287000
Bacillota
GTT
Asn
>WENV180568042
OCLM01032621
169968
Bacillota
CAT
Met
>WENV180568076
OCLM01037370
169968
Bacillota
CAT
Met
>WENV180568276
OCLM01076242
169968
Bacillota
CAT
Met
>WENV180568493
OCLM01162894
413152
Bacillota
TCC
Gly
>WENV180568163
OCLM01055123
173810
Bacillota
CAT
Met
>WENV180568564
OCLM01216845
162445
Bacillota
CAT
Met
>WENV180568567
OCLM01220622
162445
Bacillota
CAT
Met
>WENV180568616
OCLM01241462
162445
Bacillota
CAT
Met
>WENV180568246
OCLM01071156
144610
Bacillota
GTG
His
>WENV180568298
OCLM01080584
144610
Bacillota
GTG
His
>WENV180568385
OCLM01112900
144610
Bacillota
GTG
His
>WENV180568631
OCLM01311588
144610
Bacillota
GTG
His
>WENV180567843
OCLM01004467
240017
Bacillota
GCC
Gly
>WENV180568305
OCLM01082242
4624
Bacillota
GCT
Ser
>WENV180568630
OCLM01311560
263765
Bacillota
TAC
Val
>WENV180567840
OCLM01004467
263765
Bacillota
TAC
Val
>WENV180568119
OCLM01046690
18852
Bacillota
GCT
Ser
>WENV180568148
OCLM01052921
18852
Bacillota
GCT
Ser
>WENV180568402
OCLM01117944
235095
Bacillota
GGT
Thr
>WENV180567987
OCLM01022383
344183
Bacillota
CTG
Gln
>WENV180568219
OCLM01064099
154748
Bacillota
GTC
Asp
>WENV180568310
OCLM01084756
301896
Bacillota
TAC
Val
>WENV180567967
OCLM01019251
245386
Bacillota
CCA
Trp
>WENV180567919
OCLM01011864
154711
Bacillota
TGG
Pro
>WENV180568191
OCLM01059437
235127
Bacillota
TTT
Lys
>WENV180568404
OCLM01120414
342061
Bacillota
GCA
Cys
>WENV180568188
OCLM01059437
147674
Bacillota
TCT
Arg
>WENV180568001
OCLM01023986
241432
Bacillota
TGT
Thr
>WENV180568132
OCLM01048730
241432
Bacillota
TGT
Thr
>WENV180568636
OCLM01312491
241432
Bacillota
TGT
Thr
>WENV180568541
OCLM01198428
411739
Bacillota
TCC
Gly
>WENV180568185
OCLM01059307
237963
Bacillota
TTT
Lys
>WENV180567927
OCLM01012548
201667
Bacillota
TCT
Arg
>WENV180568097
OCLM01041328
436750
Bacillota
TCC
Gly
>WENV180568183
OCLM01059307
279635
Bacillota
GTG
His
>WENV180568373
OCLM01106169
157838
Bacillota
GTC
Asp
>WENV180568410
OCLM01123081
157838
Bacillota
GTC
Asp
>WENV180568420
OCLM01126545
157838
Bacillota
GTC
Asp
>WENV180568618
OCLM01241816
144583
Bacillota
ACG
Arg
>WENV180567928
OCLM01012548
236037
Bacillota
GTG
His
>WENV180568124
OCLM01046746
144652
Bacillota
GTC
Asp
>WENV180568181
OCLM01058905
144652
Bacillota
GTC
Asp
>WENV180568199
OCLM01060484
144652
Bacillota
GTC
Asp
>WENV180568286
OCLM01078046
144652
Bacillota
GTC
Asp
>WENV180568428
OCLM01128710
247734
Bacillota
TGC
Ala
>WENV180567805
OCLM01002047
144621
Bacillota
GTT
Asn
>WENV180568413
OCLM01123358
58712
Bacillota
CAG
Leu
>WENV180568150
OCLM01053638
21693
Bacillota
GCT
Ser
>WENV180568355
OCLM01101803
144762
Bacillota
TCT
Arg
>WENV180567891
OCLM01009506
245296
Bacillota
CCC
Gly
>WENV180568142
OCLM01052392
272992
Bacillota
CTT
Lys
>WENV180568105
OCLM01043638
198135
Bacillota
GAT
Ile
>WENV180568297
OCLM01080584
157635
Bacillota
TCT
Arg
>WENV180568104
OCLM01043638
299139
Bacillota
TGC
Ala
>WENV180568077
OCLM01037370
272488
Bacillota
GAA
Phe
>WENV180568174
OCLM01056688
272488
Bacillota
GAA
Phe
>WENV180568516
OCLM01178845
272488
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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