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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180734071
ODGZ01002372
256200
Betaproteobacteria
CGT
Thr
>WENV180733472
ODGZ01000093
155690
Betaproteobacteria
TCT
Arg
>WENV180735099
ODGZ01064541
97609
Betaproteobacteria
CAA
Leu
>WENV180734317
ODGZ01005501
17412
Betaproteobacteria
GGA
Ser
>WENV180733745
ODGZ01000683
239294
Betaproteobacteria
GCC
Gly
>WENV180733967
ODGZ01001684
239294
Betaproteobacteria
GCC
Gly
>WENV180734101
ODGZ01002597
239294
Betaproteobacteria
GCC
Gly
>WENV180734690
ODGZ01018129
239294
Betaproteobacteria
GCC
Gly
>WENV180734782
ODGZ01023596
239294
Betaproteobacteria
GCC
Gly
>WENV180735222
ODGZ01101047
239294
Betaproteobacteria
GCC
Gly
>WENV180735416
ODGZ01218434
239294
Betaproteobacteria
GCC
Gly
>WENV180733905
ODGZ01001304
16593
Betaproteobacteria
TGA
Ser
>WENV180733696
ODGZ01000522
159509
Betaproteobacteria
CAT
Met
>WENV180735088
ODGZ01060936
159509
Betaproteobacteria
CAT
Met
>WENV180734959
ODGZ01039980
58732
Betaproteobacteria
CAG
Leu
>WENV180734960
ODGZ01039980
58732
Betaproteobacteria
CAG
Leu
>WENV180734961
ODGZ01039980
58732
Betaproteobacteria
CAG
Leu
>WENV180735315
ODGZ01148446
62536
Betaproteobacteria
CAG
Leu
>WENV180734509
ODGZ01011040
412095
Betaproteobacteria
GCA
Cys
>WENV180733963
ODGZ01001602
235250
Betaproteobacteria
>WENV180734464
ODGZ01009528
235250
Betaproteobacteria
>WENV180733448
ODGZ01000043
95890
Betaproteobacteria
CAA
Leu
>WENV180734369
ODGZ01006860
95890
Betaproteobacteria
CAA
Leu
>WENV180733876
ODGZ01001208
240188
Betaproteobacteria
GAA
Phe
>WENV180734158
ODGZ01003224
240188
Betaproteobacteria
GAA
Phe
>WENV180734946
ODGZ01037897
240188
Betaproteobacteria
GAA
Phe
>WENV180735018
ODGZ01049361
240188
Betaproteobacteria
GAA
Phe
>WENV180735287
ODGZ01134190
147331
Betaproteobacteria
CAT
Met
>WENV180734440
ODGZ01008615
155338
Betaproteobacteria
>WENV180734599
ODGZ01014260
155338
Betaproteobacteria
>WENV180735434
ODGZ01222767
155338
Betaproteobacteria
>WENV180733496
ODGZ01000128
352197
Betaproteobacteria
GGT
Thr
>WENV180734274
ODGZ01004591
246021
Betaproteobacteria
GTT
Asn
>WENV180734627
ODGZ01015734
246021
Betaproteobacteria
GTT
Asn
>WENV180734827
ODGZ01027159
238786
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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