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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
147 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180798871
ODJC01000992
196621
Bacillota
GTC
Asp
>WENV180799186
ODJC01002766
196621
Bacillota
GTC
Asp
>WENV180799459
ODJC01007963
196621
Bacillota
GTC
Asp
>WENV180800102
ODJC01078534
196621
Bacillota
GTC
Asp
>WENV180799814
ODJC01024613
155958
Bacillota
GAT
Ile
>WENV180799332
ODJC01004928
309417
Bacillota
GGC
Ala
>WENV180799463
ODJC01008049
309417
Bacillota
GGC
Ala
>WENV180799787
ODJC01022816
158247
Bacillota
>WENV180799432
ODJC01007140
144612
Bacillota
TCT
Arg
>WENV180799889
ODJC01033841
144612
Bacillota
TCT
Arg
>WENV180799440
ODJC01007494
154063
Bacillota
CGG
Pro
>WENV180799050
ODJC01001831
267649
Bacillota
TAC
Val
>WENV180799271
ODJC01003969
267649
Bacillota
TAC
Val
>WENV180800126
ODJC01086038
235134
Bacillota
GAA
Phe
>WENV180799127
ODJC01002333
235098
Bacillota
GAC
Val
>WENV180799407
ODJC01006432
235098
Bacillota
GAC
Val
>WENV180799686
ODJC01017249
235098
Bacillota
GAC
Val
>WENV180800308
ODJC01196468
338152
Bacillota
TTC
Glu
>WENV180799861
ODJC01029045
148239
Bacillota
TCT
Arg
>WENV180799165
ODJC01002520
44854
Bacillota
TGA
Ser
>WENV180799349
ODJC01005519
235154
Bacillota
GTT
Asn
>WENV180799714
ODJC01019392
235154
Bacillota
GTT
Asn
>WENV180799555
ODJC01010693
144577
Bacillota
GAT
Ile
>WENV180799808
ODJC01023742
144577
Bacillota
GAT
Ile
>WENV180799645
ODJC01013943
37071
Bacillota
TGA
Ser
>WENV180799457
ODJC01007963
304022
Bacillota
GCC
Gly
>WENV180799461
ODJC01007963
304022
Bacillota
GCC
Gly
>WENV180799598
ODJC01012063
304022
Bacillota
GCC
Gly
>WENV180799689
ODJC01017434
304022
Bacillota
GCC
Gly
>WENV180800103
ODJC01078534
304022
Bacillota
GCC
Gly
>WENV180799351
ODJC01005519
429443
Bacillota
GCA
Cys
>WENV180799225
ODJC01003193
59312
Bacillota
CAG
Leu
>WENV180799990
ODJC01049902
238910
Bacillota
CTT
Lys
>WENV180799158
ODJC01002495
338147
Bacillota
CTC
Glu
>WENV180799211
ODJC01003099
338147
Bacillota
CTC
Glu
>WENV180800327
ODJC01201918
338147
Bacillota
CTC
Glu
>WENV180799565
ODJC01010959
235150
Bacillota
TGC
Ala
>WENV180799754
ODJC01021044
235137
Bacillota
TGC
Ala
>WENV180800033
ODJC01056486
235137
Bacillota
TGC
Ala
>WENV180800038
ODJC01058594
235137
Bacillota
TGC
Ala
>WENV180800076
ODJC01073062
235137
Bacillota
TGC
Ala
>WENV180800161
ODJC01101600
235137
Bacillota
TGC
Ala
>WENV180799737
ODJC01020269
345329
Bacillota
TTC
Glu
>WENV180799577
ODJC01011405
235114
Bacillota
TTT
Lys
>WENV180800152
ODJC01098016
341763
Bacillota
CTC
Glu
>WENV180800182
ODJC01110544
37083
Bacillota
TGA
Ser
>WENV180799918
ODJC01037729
429429
Bacillota
CCA
Trp
>WENV180800047
ODJC01060729
313454
Bacillota
GAA
Phe
>WENV180799224
ODJC01003193
44859
Bacillota
AAG
Leu
>WENV180799302
ODJC01004453
11034
Bacillota
GGA
Ser
>WENV180799619
ODJC01012929
11034
Bacillota
GGA
Ser
>WENV180799458
ODJC01007963
235117
Bacillota
TAC
Val
>WENV180799599
ODJC01012063
235117
Bacillota
TAC
Val
>WENV180799690
ODJC01017434
235117
Bacillota
TAC
Val
>WENV180799817
ODJC01025588
156937
Bacillota
GTG
His
>WENV180799460
ODJC01007963
235079
Bacillota
GAA
Phe
>WENV180800005
ODJC01050801
235079
Bacillota
GAA
Phe
>WENV180800339
ODJC01202446
235079
Bacillota
GAA
Phe
>WENV180799554
ODJC01010693
235087
Bacillota
TGC
Ala
>WENV180799469
ODJC01008116
338149
Bacillota
CTC
Glu
>WENV180800295
ODJC01189494
338149
Bacillota
CTC
Glu
>WENV180798646
ODJC01000333
271471
Bacillota
GCC
Gly
>WENV180798993
ODJC01001432
271471
Bacillota
GCC
Gly
>WENV180799000
ODJC01001476
245298
Bacillota
CGG
Pro
>WENV180799278
ODJC01004054
37269
Bacillota
TGA
Ser
>WENV180799525
ODJC01009965
37269
Bacillota
TGA
Ser
>WENV180799142
ODJC01002406
155089
Bacillota
CAT
Met
>WENV180799604
ODJC01012330
155089
Bacillota
CAT
Met
>WENV180799923
ODJC01038329
287000
Bacillota
GTT
Asn
>WENV180799942
ODJC01041471
287000
Bacillota
GTT
Asn
>WENV180799657
ODJC01014971
169968
Bacillota
CAT
Met
>WENV180799674
ODJC01016670
144599
Bacillota
GTC
Asp
>WENV180798643
ODJC01000333
235078
Bacillota
TAC
Val
>WENV180798991
ODJC01001432
235078
Bacillota
TAC
Val
>WENV180800052
ODJC01065508
153911
Bacillota
GAT
Ile
>WENV180799575
ODJC01011405
144610
Bacillota
GTG
His
>WENV180799862
ODJC01029045
144610
Bacillota
GTG
His
>WENV180798884
ODJC01001023
240017
Bacillota
GCC
Gly
>WENV180800127
ODJC01086038
240017
Bacillota
GCC
Gly
>WENV180798837
ODJC01000940
411547
Bacillota
CTG
Gln
>WENV180798999
ODJC01001476
411547
Bacillota
CTG
Gln
>WENV180799773
ODJC01022103
411547
Bacillota
CTG
Gln
>WENV180799886
ODJC01033546
147684
Bacillota
ACG
Arg
>WENV180799166
ODJC01002520
4624
Bacillota
GCT
Ser
>WENV180798883
ODJC01001023
263765
Bacillota
TAC
Val
>WENV180799774
ODJC01022122
263765
Bacillota
TAC
Val
>WENV180800124
ODJC01086038
263765
Bacillota
TAC
Val
>WENV180799526
ODJC01009965
10680
Bacillota
GGA
Ser
>WENV180799528
ODJC01010011
313104
Bacillota
TAC
Val
>WENV180799830
ODJC01026009
18852
Bacillota
GCT
Ser
>WENV180798869
ODJC01000992
235095
Bacillota
GGT
Thr
>WENV180798872
ODJC01000992
235095
Bacillota
GGT
Thr
>WENV180799187
ODJC01002766
235095
Bacillota
GGT
Thr
>WENV180799677
ODJC01016670
185292
Bacillota
ACG
Arg
>WENV180798960
ODJC01001262
419639
Bacillota
GCA
Cys
>WENV180800011
ODJC01052421
301896
Bacillota
TAC
Val
>WENV180799085
ODJC01002088
411549
Bacillota
TTG
Gln
>WENV180799544
ODJC01010361
411549
Bacillota
TTG
Gln
>WENV180799482
ODJC01008698
235142
Bacillota
CTT
Lys
>WENV180799798
ODJC01023180
59296
Bacillota
AAG
Leu
>WENV180799965
ODJC01045157
154711
Bacillota
TGG
Pro
>WENV180798975
ODJC01001356
148188
Bacillota
CCG
Arg
>WENV180799288
ODJC01004118
148188
Bacillota
CCG
Arg
>WENV180799693
ODJC01017836
148188
Bacillota
CCG
Arg
>WENV180799136
ODJC01002394
163943
Bacillota
GTC
Asp
>WENV180799840
ODJC01027762
163943
Bacillota
GTC
Asp
>WENV180799929
ODJC01038674
298620
Bacillota
CAT
Met
>WENV180799053
ODJC01001861
235124
Bacillota
TGG
Pro
>WENV180799586
ODJC01011725
235124
Bacillota
TGG
Pro
>WENV180799535
ODJC01010136
338129
Bacillota
TGT
Thr
>WENV180799073
ODJC01001989
157838
Bacillota
GTC
Asp
>WENV180800046
ODJC01060729
157838
Bacillota
GTC
Asp
>WENV180799341
ODJC01005244
144583
Bacillota
ACG
Arg
>WENV180799400
ODJC01006399
144583
Bacillota
ACG
Arg
>WENV180799699
ODJC01018092
144652
Bacillota
GTC
Asp
>WENV180800148
ODJC01096397
247734
Bacillota
TGC
Ala
>WENV180799185
ODJC01002766
235171
Bacillota
CCA
Trp
>WENV180799019
ODJC01001566
91122
Bacillota
CAA
Leu
>WENV180799202
ODJC01002896
144621
Bacillota
GTT
Asn
>WENV180799470
ODJC01008116
144621
Bacillota
GTT
Asn
>WENV180799952
ODJC01042752
144621
Bacillota
GTT
Asn
>WENV180800296
ODJC01189494
144621
Bacillota
GTT
Asn
>WENV180799365
ODJC01005749
235113
Bacillota
GAA
Phe
>WENV180799546
ODJC01010440
277200
Bacillota
GGC
Ala
>WENV180799151
ODJC01002441
243098
Bacillota
GGT
Thr
>WENV180798978
ODJC01001367
58712
Bacillota
CAG
Leu
>WENV180799009
ODJC01001532
58712
Bacillota
CAG
Leu
>WENV180799049
ODJC01001803
58712
Bacillota
CAG
Leu
>WENV180799067
ODJC01001974
58712
Bacillota
CAG
Leu
>WENV180799547
ODJC01010511
245296
Bacillota
CCC
Gly
>WENV180800319
ODJC01198071
272992
Bacillota
CTT
Lys
>WENV180799791
ODJC01022945
272992
Bacillota
CTT
Lys
>WENV180798772
ODJC01000674
344240
Bacillota
GCC
Gly
>WENV180798790
ODJC01000730
344240
Bacillota
GCC
Gly
>WENV180798959
ODJC01001262
344240
Bacillota
GCC
Gly
>WENV180798771
ODJC01000674
196632
Bacillota
GTC
Asp
>WENV180799191
ODJC01002817
196632
Bacillota
GTC
Asp
>WENV180800329
ODJC01201981
196632
Bacillota
GTC
Asp
>WENV180799984
ODJC01048597
299139
Bacillota
TGC
Ala
>WENV180799210
ODJC01003084
144594
Bacillota
CAC
Val
>WENV180799473
ODJC01008246
144594
Bacillota
CAC
Val
>WENV180800087
ODJC01075343
95563
Bacillota
GTA
Tyr
>WENV180799005
ODJC01001504
414486
Bacillota
CCC
Gly
>WENV180799236
ODJC01003352
338128
Bacillota
TTC
Glu
>WENV180798789
ODJC01000730
245344
Bacillota
GAA
Phe
>WENV180798958
ODJC01001262
245344
Bacillota
GAA
Phe
>WENV180799192
ODJC01002817
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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